RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SERPINB7O75635 380 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SNRPB2P08579 225 aaKnown RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 GABRB3P28472 473 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 MATKP42679 507 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SLC26A2P50443 739 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PSMD7P51665 324 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SLC5A3P53794 718 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 BCAT1P54687 386 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 GSTM4Q03013 218 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 KCNC4Q03721 635 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 RALGDSQ12967 914 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 TGFBIQ15582 683 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 INTS6LQ5JSJ4 861 aaKnown RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 ASTLQ6HA08 431 aaPredicted RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 DCDC5Q6ZRR9 648 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 BNIPLQ7Z465 357 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PTAR1Q7Z6K3 402 aaPredicted RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 ERO1BQ86YB8 467 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 CNTN4Q8IWV2 1026 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ZNF786Q8N393 782 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 DNAAF3Q8N9W5 541 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 DDHD1Q8NEL9 900 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SPPL2BQ8TCT7 592 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 DQX1Q8TE96 717 aaKnown RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 CLEC4CQ8WTT0 213 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ROPN1LQ96C74 230 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 THAP11Q96EK4 314 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 MOCOSQ96EN8 888 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SLC45A3Q96JT2 553 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 HSFY1Q96LI6 401 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 COG8Q96MW5 612 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 GPR20Q99678 358 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 APBA2Q99767 749 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 TUBA1CQ9BQE3 449 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 MRPL45Q9BRJ2 306 aaKnown RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 MLPHQ9BV36 600 aaPredicted RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 ADI1Q9BV57 179 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 KIFC1Q9BW19 673 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 CCDC68Q9H2F9 335 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ADAMTS10Q9H324 1103 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 CXorf21Q9HAI6 301 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 TRPC7Q9HCX4 862 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 MYOZ2Q9NPC6 264 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SMOXQ9NWM0 555 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 TRHDEQ9UKU6 1024 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 COQ6Q9Y2Z9 468 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ACOT9Q9Y305 439 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 A0A087X1B8 175 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 IQCA1LA6NCM1 817 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ZNF839A8K0R7 811 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 BBIP1A8MTZ0 92 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 TMEM233B4DJY2 109 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 GIPC1O14908 333 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 UBDO15205 165 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PHGDHO43175 533 aaKnown RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 NRP2O60462 931 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SNAP91O60641 907 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 TIPRLO75663 272 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ATE1O95260 518 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ESRRBO95718 433 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PGK1P00558 417 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ALDH2P05091 517 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 MYL3P08590 195 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 IQCF3P0C7M6 154 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 CKMT2P17540 419 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PTPRAP18433 802 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ATP6V1B2P21281 511 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ATP5F1P24539 256 aaPredicted RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 MAGEA10P43363 369 aaPredicted RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 SULT1E1P49888 294 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 HMGCS2P54868 508 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 C21orf59P57076 290 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 RAB10P61026 200 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 MPP1Q00013 466 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 GRSF1Q12849 480 aaKnown RBP eCLIP7.37□□□□□ -1.23
USP48-206ENST00000464577 MERTKQ12866 999 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 OLIG2Q13516 323 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 INPP5AQ14642 412 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ATP6AP1Q15904 470 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 MOGQ16653 247 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ANKDD1AQ495B1 522 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SLC36A3Q495N2 470 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SPATS1Q496A3 300 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 AGKQ53H12 422 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 CERCAMQ5T4B2 595 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 OTUD1Q5VV17 481 aaPredicted RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 PRMT9Q6P2P2 845 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 GADL1Q6ZQY3 521 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SPRED1Q7Z699 444 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 FAM131BQ86XD5 332 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 KLHDC8BQ8IXV7 354 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 CCNYL1Q8N7R7 359 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PDPRQ8NCN5 879 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PNPT1Q8TCS8 783 aaKnown RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 CHPT1Q8WUD6 406 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 SEPT8Q92599 483 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PPWD1Q96BP3 646 aaKnown RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 CCDC126Q96EE4 140 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PLEKHA8Q96JA3 519 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms