RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MBTD1Q05BQ5 628 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 PTPRNQ16849 979 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 TEX44Q53QW1 395 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 PPM1LQ5SGD2 360 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 LRRC8DQ7L1W4 858 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 PIWIL4Q7Z3Z4 852 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 GLT6D1Q7Z4J2 308 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 NT5DC4Q86YG4 428 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ARL10Q8N8L6 244 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SLCO2A1Q92959 643 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 FAM120BQ96EK7 910 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 COLEC11Q9BWP8 271 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 PARVBQ9HBI1 364 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ENTPD7Q9NQZ7 604 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 MARCH2Q9P0N8 246 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 PRKAG3Q9UGI9 489 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 GNEQ9Y223 722 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 PSAT1Q9Y617 370 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 BCLAF3A2AJT9 711 aaKnown RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 AHCYL1O43865 530 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 MAN1A2O60476 641 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 CABYRO75952 493 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 WFS1O76024 890 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 ZBTB11O95625 1053 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 VAV1P15498 845 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 TSHRP16473 764 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 MZF1P28698 734 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 PBLDP30039 288 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 RPL5P46777 297 aaKnown RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 LSM12Q3MHD2 195 aaKnown RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 SYTL3Q4VX76 610 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 LIN52Q52LA3 116 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 DRICH1Q6PGQ1 229 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 RPS27LQ71UM5 84 aaKnown RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 CENPLQ8N0S6 344 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 GFM2Q969S9 779 aaKnown RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 VAT1Q99536 393 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 DUSP16Q9BY84 665 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 POLR1BQ9H9Y6 1135 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 EIF3LQ9Y262 564 aaKnown RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 U3KQV3 271 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 TMEM247A6NEH6 219 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 NT5C1B-RDH14C9J2C7 533 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 TSPAN1O60635 241 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 DEAF1O75398 565 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 CRTAMO95727 393 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 GRM5P41594 1212 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 HALP42357 657 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 BOP1Q14137 746 aaKnown RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 SIX1Q15475 284 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 LRRC8BQ6P9F7 803 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 HEATR4Q86WZ0 1026 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 TREML1Q86YW5 311 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 PHTF2Q8N3S3 785 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 PHF12Q96QT6 1004 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 PEBP4Q96S96 227 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 PRKD2Q9BZL6 878 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 DPY30Q9C005 99 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 FAM192AQ9GZU8 254 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 PCDHAC1Q9H158 963 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 RHOJQ9H4E5 214 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 TMEM233B4DJY2 109 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 SEC22BO75396 215 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 DAB1O75553 588 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 ZNF189O75820 626 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 NTRK1P04629 796 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 MBL2P11226 248 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 IVDP26440 423 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 CCNFP41002 786 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 ABL2P42684 1182 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 IDH3AP50213 366 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 CCNG1P51959 295 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 KLF1Q13351 362 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 NFE2Q16621 373 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 FSCN1Q16658 493 aaKnown RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 CCDC142Q17RM4 750 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 SLC9B1Q4ZJI4 515 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 CACHD1Q5VU97 1274 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 ARHGAP17Q68EM7 881 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 TTC23LQ6PF05 361 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 SLC26A9Q7LBE3 791 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 DDX53Q86TM3 631 aaKnown RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 OR6K2Q8NGY2 324 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 OR52B2Q96RD2 323 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 TUBGCP5Q96RT8 1024 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 RNF39Q9H2S5 420 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 EBF2Q9HAK2 575 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 GBA2Q9HCG7 927 aaPredicted RBP9.16□□□□□ -0.94
HPS4-208ENST00000464362 MRGBPQ9NV56 204 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 SCN3BQ9NY72 215 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 KLQ9UEF7 1012 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 ST3GAL5Q9UNP4 418 aa9.16□□□□□ -0.94
HPS4-208ENST00000464362 PRR23AA6NEV1 266 aa9.15□□□□□ -0.94
HPS4-208ENST00000464362 CD52P31358 61 aa9.15□□□□□ -0.94
HPS4-208ENST00000464362 RGS2P41220 211 aa9.15□□□□□ -0.94
HPS4-208ENST00000464362 CCR10P46092 362 aa9.15□□□□□ -0.94
HPS4-208ENST00000464362 TAS2R39P59534 338 aa9.15□□□□□ -0.94
HPS4-208ENST00000464362 PRKD1Q15139 912 aaPredicted RBP9.15□□□□□ -0.94
HPS4-208ENST00000464362 GPR158Q5T848 1215 aa9.15□□□□□ -0.94
HPS4-208ENST00000464362 GPR107Q5VW38 600 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms