RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 FAM228BP0C875 321 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 THEGLP0DJG4 465 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 CYP2A6P11509 494 aaPredicted RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 PRLRP16471 622 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 ZFXP17010 805 aaPredicted RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 DRD3P35462 400 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 HNF1BP35680 557 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 PBX1P40424 430 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 ARHGAP25P42331 645 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 RABIFP47224 123 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 EPHB1P54762 984 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 AP1S1P61966 158 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 PPP2CBP62714 309 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 PPP2CAP67775 309 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 FAM193AP78312 1265 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 DAB2P98082 770 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 IL10RBQ08334 325 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 MESDQ14696 234 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 LBRQ14739 615 aaKnown RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 DPYSL2Q16555 572 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 ATXN7L2Q5T6C5 722 aaPredicted RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 N4BP2L1Q5TBK1 243 aaPredicted RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 BZW1Q7L1Q6 419 aaKnown RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 PARS2Q7L3T8 475 aaKnown RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 GALNT15Q8N3T1 639 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 NIPA2Q8N8Q9 360 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 DENND6BQ8NEG7 585 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 HCAR2Q8TDS4 363 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 PDCD6IPQ8WUM4 868 aaKnown RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 BTN2A2Q8WVV5 523 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 CALR3Q96L12 384 aaKnown RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 DNAJC7Q99615 494 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 SYT11Q9BT88 431 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 SLC17A9Q9BYT1 436 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 ERVMER34-1Q9H9K5 563 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 NHEJ1Q9H9Q4 299 aaPredicted RBP9.07□□□□□ -0.96
DDX39B-216ENST00000462421 SCUBE2Q9NQ36 999 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 SARDHQ9UL12 918 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 WASF2Q9Y6W5 498 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 VPS13AQ96RL7 3174 aa9.07□□□□□ -0.96
DDX39B-216ENST00000462421 SPAARA0A1B0GVQ0 90 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 I6L893 689 aaPredicted RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 TOR1BO14657 336 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 TNFSF14O43557 240 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 LATO43561 262 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 ZMPSTE24O75844 475 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 PROSCO94903 275 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 LDOC1O95751 146 aaPredicted RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 CTSLP07711 333 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 C7P10643 843 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 TNNT1P13805 278 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 CES1P23141 567 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 HNRNPH3P31942 346 aaKnown RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 MAN1A1P33908 653 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 SLC1A1P43005 524 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 CTSKP43235 329 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 SCNN1BP51168 640 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 BLKP51451 505 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 DUSP3P51452 185 aaPredicted RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 ADKP55263 362 aaKnown RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 NXPH1P58417 271 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 HNRNPKP61978 463 aaKnown RBP eCLIP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 IL9RQ01113 521 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 OGDHQ02218 1023 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 ARHGEF7Q14155 803 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 IFI16Q16666 785 aaKnown RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 RAB6CQ53S08 254 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 PIP5KL1Q5T9C9 394 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 CCDC181Q5TID7 509 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 MARC1Q5VT66 337 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 HGSNATQ68CP4 663 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 CCDC70Q6NSX1 233 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 LAYNQ6UX15 382 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 SRLQ86TD4 932 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 CCNYQ8ND76 341 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 OR2I1PQ8NGU4 316 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 SCG3Q8WXD2 468 aaKnown RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 KLK6Q92876 244 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 ARRDC3Q96B67 414 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 LRRC45Q96CN5 670 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 EXOC2Q96KP1 924 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 DUSP23Q9BVJ7 150 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 CPEB1Q9BZB8 566 aaKnown RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 RAB6CQ9H0N0 254 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 SUV39H2Q9H5I1 410 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 NDFIP2Q9NV92 336 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 DNAJC28Q9NX36 388 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 KCTD5Q9NXV2 234 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 DDX56Q9NY93 547 aaKnown RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 NCKIPSDQ9NZQ3 722 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 ARHGAP20Q9P2F6 1191 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 DKK3Q9UBP4 350 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 DNPEPQ9ULA0 475 aa9.06□□□□□ -0.96
DDX39B-216ENST00000462421 FNDC3AQ9Y2H6 1198 aaKnown RBP9.06□□□□□ -0.96
DDX39B-216ENST00000462421 RALGAPA1Q6GYQ0 2036 aa9.05□□□□□ -0.96
DDX39B-216ENST00000462421 SPAG17Q6Q759 2223 aa9.05□□□□□ -0.96
DDX39B-216ENST00000462421 A0A1B0GTQ1 180 aa9.05□□□□□ -0.96
DDX39B-216ENST00000462421 LRRD1A4D1F6 860 aa9.05□□□□□ -0.96
DDX39B-216ENST00000462421 GOLGA6CA6NDK9 693 aa9.05□□□□□ -0.96
DDX39B-216ENST00000462421 GOLGA6BA6NDN3 693 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms