RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 KLHDC7AQ5VTJ3 777 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 INO80CQ6PI98 192 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 CLEC18BQ6UXF7 455 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 C12orf40Q86WS4 652 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 MYLK4Q86YV6 388 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 SCN4BQ8IWT1 228 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 CRYBG2Q8N1P7 616 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 BEND7Q8N7W2 519 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 UBR7Q8N806 425 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 C12orf29Q8N999 325 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 SLC4A11Q8NBS3 891 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 RBBP8NLQ8NC74 664 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 CLEC18CQ8NCF0 446 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 STKLD1Q8NE28 680 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 FBXO27Q8NI29 283 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 FAM81AQ8TBF8 368 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 SLC2A14Q8TDB8 520 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 ZFAND2BQ8WV99 257 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 GATAD2BQ8WXI9 593 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 PLD4Q96BZ4 506 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 THOC1Q96FV9 657 aaKnown RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 SMARCD1Q96GM5 515 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 FUBP3Q96I24 572 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 RSRC1Q96IZ7 334 aaKnown RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 CNDP2Q96KP4 475 aaKnown RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 MRGPRX1Q96LB2 322 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 PKMYT1Q99640 499 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 ZCCHC2Q9C0B9 1178 aaKnown RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 ZNF518BQ9C0D4 1074 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 BHLHE41Q9C0J9 482 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 CD248Q9HCU0 757 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 NLRC4Q9NPP4 1024 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 PLCB1Q9NQ66 1216 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 KRT82Q9NSB4 513 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 HCN2Q9UL51 889 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 KIAA1257Q9ULG3 409 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 ANKRD6Q9Y2G4 727 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 SIK3Q9Y2K2 1263 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 DAAM1Q9Y4D1 1078 aa6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 ARID1BQ8NFD5 2236 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-204ENST00000462198 CDC14CA4D256 554 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 LEFTY2O00292 366 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 FOXN3O00409 490 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 EPHB6O15197 1021 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 CYP26A1O43174 497 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 THAP12O43422 761 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 MED7O43513 233 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 PAGE1O75459 146 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 URI1O94763 535 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 NOL4O94818 638 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 ITGB6P18564 788 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 ACO1P21399 889 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 STAT1P42224 750 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 ARHGAP25P42331 645 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 MAGEA11P43364 429 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 GPR15P49685 360 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 CCT8P50990 548 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 AFF3P51826 1226 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 CCNHP51946 323 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 SH3BGRP55822 239 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 BPIFB4P59827 614 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 ZXDBP98169 803 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 IL9RQ01113 521 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 ROR2Q01974 943 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 IFT88Q13099 833 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 MPP2Q14168 576 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 GOLGA7BQ2TAP0 167 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 INAVAQ3KP66 663 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 LINC00303Q3SY05 128 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 RPS26P11Q5JNZ5 115 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 SDHAF4Q5VUM1 108 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 DPY19L2P1Q6NXN4 242 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 VSTM1Q6UX27 236 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 KIAA1324Q6UXG2 1013 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 KDM7AQ6ZMT4 941 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 BNC2Q6ZN30 1099 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 HDXQ7Z353 690 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 FAM35AQ86V20 835 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 NLRP8Q86W28 1048 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 GATAD2AQ86YP4 633 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 MIB1Q86YT6 1006 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 CHPFQ8IZ52 775 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 FUKQ8N0W3 1084 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 LSMEM2Q8N112 164 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 NAT16Q8N8M0 369 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 TC2NQ8N9U0 490 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 THAP3Q8WTV1 239 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 SHC3Q92529 594 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 GOLGA1Q92805 767 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 IGSF8Q969P0 613 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 SPAG5Q96R06 1193 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 WDR24Q96S15 920 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 ACOX2Q99424 681 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 NUP58Q9BVL2 599 aa6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 NAA15Q9BXJ9 866 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-204ENST00000462198 STK33Q9BYT3 514 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms