RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 WASF3Q9UPY6 502 aa9□□□□□ -0.97
LDB1-203ENST00000461873 CA5BQ9Y2D0 317 aa9□□□□□ -0.97
LDB1-203ENST00000461873 FADS3Q9Y5Q0 445 aa9□□□□□ -0.97
LDB1-203ENST00000461873 WASF2Q9Y6W5 498 aa9□□□□□ -0.97
LDB1-203ENST00000461873 IGLON5A6NGN9 336 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 EIF4E1BA6NMX2 242 aaKnown RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 SRRM3A6NNA2 597 aaPredicted RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 FAM72CH0Y354 149 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 H3BRJ5 948 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 DFFAO00273 331 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 RIOK3O14730 519 aaKnown RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 WNT9AO14904 365 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 TEX33O43247 280 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 LZTS3O60299 673 aaPredicted RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 ZMPSTE24O75844 475 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 NEBLO76041 1014 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 GZMAP12544 262 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 CTSEP14091 401 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 SERPINA4P29622 427 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 RPIAP49247 311 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 BLKP51451 505 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 RENBPP51606 427 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 NDST2P52849 883 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 UBASH3AP57075 661 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 CLDN2P57739 230 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 TAS2R38P59533 333 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 PTP4A2Q12974 167 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 DNAJC3Q13217 504 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 ZNF211Q13398 564 aaPredicted RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 MAMLD1Q13495 774 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 NCAPHQ15003 741 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 HADHQ16836 314 aaKnown RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 ODF2Q5BJF6 829 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 ATXN7L2Q5T6C5 722 aaPredicted RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 FAXCQ5TGI0 409 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 FAM72AQ5TYM5 149 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 SEL1L3Q68CR1 1132 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 FAM72DQ6L9T8 149 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 KYAT3Q6YP21 454 aaKnown RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 PARS2Q7L3T8 475 aaKnown RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 IRF2BP2Q7Z5L9 587 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 NLRP14Q86W24 1093 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 PARGQ86W56 976 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 FAM72BQ86X60 149 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 PYROXD2Q8N2H3 581 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 DENND6BQ8NEG7 585 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 OR13H1Q8NG92 308 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 NXPE2Q96DL1 559 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 HMCESQ96FZ2 354 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 IL12RB2Q99665 862 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 SLC13A1Q9BZW2 595 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 ATP13A3Q9H7F0 1226 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 NDFIP2Q9NV92 336 aa8.99□□□□□ -0.97
LDB1-203ENST00000461873 GOLGA4Q13439 2230 aaKnown RBP8.99□□□□□ -0.97
LDB1-203ENST00000461873 MAP1BP46821 2468 aaKnown RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 DOCK9Q9BZ29 2069 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 FAM149AA5PLN7 773 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 TRABD2BA6NFA1 517 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 TMEM110-MUSTN1A8MSY1 372 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 WASH4PA8MWX3 477 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 TOR1BO14657 336 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 RRP8O43159 456 aaKnown RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 ATMINO43313 823 aaPredicted RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 KRT10P13645 584 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 JUNDP17535 347 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 DGKAP23743 735 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 GKP32189 559 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 BCL2L1Q07817 233 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 CYP4F3Q08477 520 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 SERINC3Q13530 473 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 KRT81Q14533 505 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 RFTN1Q14699 578 aaPredicted RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 ACAP1Q15027 740 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 SMAD1Q15797 465 aaKnown RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 RAB6CQ53S08 254 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 ZNF542PQ5EBM4 170 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 HES3Q5TGS1 186 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 MANEALQ5VSG8 457 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 ABI3BPQ7Z7G0 1075 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 PROSER1Q86XN7 944 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 SPATS2Q86XZ4 545 aaKnown RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 PSTKQ8IV42 348 aaKnown RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 NDUFAF2Q8N183 169 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 UMODL1-AS1Q8N2C9 162 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 LZTR1Q8N653 840 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 TMEM145Q8NBT3 493 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 MDM1Q8TC05 714 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 LMX1AQ8TE12 382 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 CPLX3Q8WVH0 158 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 BAP1Q92560 729 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 CELF6Q96J87 481 aaKnown RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 EXOC2Q96KP1 924 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 ZNF641Q96N77 438 aaPredicted RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 LENG8Q96PV6 779 aaPredicted RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 RAB6CQ9H0N0 254 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 DEF6Q9H4E7 631 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 USP29Q9HBJ7 922 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 ZNHIT6Q9NWK9 470 aaKnown RBP8.98□□□□□ -0.97
LDB1-203ENST00000461873 NLGN3Q9NZ94 848 aa8.98□□□□□ -0.97
LDB1-203ENST00000461873 AIPL1Q9NZN9 384 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms