RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 A0A1W2PQM1 296 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 DDTLA6NHG4 134 aaPredicted RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 C2CD4BA6NLJ0 364 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 LINC01548A6NM66 108 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 FOXO6A8MYZ6 492 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 BCAT2O15382 392 aaPredicted RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 RNMTO43148 476 aaKnown RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 ZNF500O60304 480 aaPredicted RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 ATP2C2O75185 946 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 IPO7O95373 1038 aaKnown RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 CLTBP09497 229 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 AKR1B1P15121 316 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 PORP16435 677 aaPredicted RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 MCM3P25205 808 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 GCH1P30793 250 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 SLC16A2P36021 539 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 GPR12P47775 334 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 GABRB2P47870 512 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 ELLP55199 621 aaPredicted RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 TGFB2P61812 414 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 GAD2Q05329 585 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 SLC10A2Q12908 348 aaPredicted RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 ITGADQ13349 1161 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 ZSCAN23Q3MJ62 389 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 SYTL3Q4VX76 610 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 EARS2Q5JPH6 523 aaKnown RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 ZNF362Q5T0B9 420 aaPredicted RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 ZNF280DQ6N043 979 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 CES5AQ6NT32 575 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 HMBOX1Q6NT76 420 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 ZNF793Q6ZN11 406 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 LDLRAD3Q86YD5 345 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 TDRPQ86YL5 185 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 TMC8Q8IU68 726 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 CNGA4Q8IV77 575 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 DDIASQ8IXT1 998 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 SLC25A41Q8N5S1 370 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 LRRC57Q8N9N7 239 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 BOLLQ8N9W6 283 aaKnown RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 NEK9Q8TD19 979 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 HDAC7Q8WUI4 952 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 RNF183Q96D59 192 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 PERPQ96FX8 193 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 FEM1CQ96JP0 617 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 CLMNQ96JQ2 1002 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 SH2D3AQ9BRG2 576 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 PIMREGQ9BSJ6 248 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 TUBB6Q9BUF5 446 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 KIF9Q9HAQ2 790 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 BPIFA1Q9NP55 256 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 PDGFCQ9NRA1 345 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 SMYD2Q9NRG4 433 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 PAPOLBQ9NRJ5 636 aaKnown RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 SLC6A13Q9NSD5 602 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 TMEM45AQ9NWC5 275 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 NKIRAS2Q9NYR9 191 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 NCKIPSDQ9NZQ3 722 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 DLGAP2Q9P1A6 1054 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 KLHL13Q9P2N7 655 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 SLCO3A1Q9UIG8 710 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 INTS6Q9UL03 887 aaKnown RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 MTMR6Q9Y217 621 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 AAR2Q9Y312 384 aaKnown RBP3.33□□□□□ -1.88
VCL-203ENST00000461383 CAPN7Q9Y6W3 813 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 WDR17Q8IZU2 1322 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 MST1RQ04912 1400 aa3.33□□□□□ -1.88
VCL-203ENST00000461383 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 C17orf102A2RUQ5 167 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 MANSC4A6NHS7 340 aaPredicted RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 PRPF4O43172 522 aaKnown RBP eCLIP3.32□□□□□ -1.88
VCL-203ENST00000461383 LIASO43766 372 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 PROP1O75360 226 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 IGLV2-14P01704 120 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 TFP02787 698 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 HEXAP06865 529 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 TFPIP10646 304 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 SAT1P21673 171 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 BMP5P22003 454 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 PROZP22891 400 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 PSMB10P40306 273 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 CLCN5P51795 746 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 EFNA5P52803 228 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 CDH8P55286 799 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 HDAC4P56524 1084 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 TMPRSS3P57727 454 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 RPS13P62277 151 aaKnown RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 IRX6P78412 446 aaPredicted RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 LRMPQ12912 555 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 CSTF3Q12996 717 aaKnown RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 ACVR2BQ13705 512 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 RNPS1Q15287 305 aaKnown RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 DUSP28Q4G0W2 176 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 ENTPD8Q5MY95 495 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 GKAP1Q5VSY0 366 aaPredicted RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 NCAPH2Q6IBW4 605 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 CHST9Q7L1S5 443 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 GALNT5Q7Z7M9 940 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 SERPINA11Q86U17 422 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 TICAM1Q8IUC6 712 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 ARHGAP12Q8IWW6 846 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms