RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 UPP1Q16831 310 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 SFT2D3Q587I9 215 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 PATL1Q86TB9 770 aaKnown RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TMPRSS6Q8IU80 811 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 KCTD13Q8WZ19 329 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 RTP4Q96DX8 246 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 ZNF512Q96ME7 567 aaPredicted RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 SLC39A8Q9C0K1 460 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 BRCA2P51587 3418 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 ARHGEF37A1IGU5 675 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 KPNA6O60684 536 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 MLNP12872 115 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 PAMP19021 973 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 MSX2P35548 267 aaPredicted RBP15.58■□□□□ 0.09
LMNB1-203ENST00000460265 ATN1P54259 1190 aaPredicted RBP15.58■□□□□ 0.09
LMNB1-203ENST00000460265 AQP4P55087 323 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 TBX4P57082 545 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 PHEXP78562 749 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 CFAP52Q8N1V2 620 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 ICA1LQ8NDH6 482 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 RMDN1Q96DB5 314 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 ACBD6Q9BR61 282 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 WDR6Q9NNW5 1121 aaKnown RBP15.58■□□□□ 0.09
LMNB1-203ENST00000460265 MOCS1Q9NZB8 636 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 CRYL1Q9Y2S2 319 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 ACOT9Q9Y305 439 aa15.58■□□□□ 0.09
LMNB1-203ENST00000460265 TIMM44O43615 452 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 IRF1P10914 325 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 NADK2Q4G0N4 442 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 C17orf99Q6UX52 265 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 LINC00523Q86TU6 105 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 LRRC43Q8N309 656 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 ARNTL2Q8WYA1 636 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 TEKT5Q96M29 485 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 PANX3Q96QZ0 392 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 TBL1YQ9BQ87 522 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 IL22Q9GZX6 179 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 PNPLA8Q9NP80 782 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 INIPQ9NRY2 104 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 NDFIP2Q9NV92 336 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 COPG2Q9UBF2 871 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 TAGLN3Q9UI15 199 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 HAS3O00219 553 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 GABRDO14764 452 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 DCLK1O15075 740 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 VILLO15195 856 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 TRIM13O60858 407 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 ENO3P13929 434 aaPredicted RBP15.58■□□□□ 0.08
LMNB1-203ENST00000460265 EPHA3P29320 983 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 CD86P42081 329 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 CCR10P46092 362 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 TMED10P49755 219 aaKnown RBP15.58■□□□□ 0.08
LMNB1-203ENST00000460265 NAA20P61599 178 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 TCHHL1Q5QJ38 904 aaPredicted RBP15.58■□□□□ 0.08
LMNB1-203ENST00000460265 NET1Q7Z628 596 aaPredicted RBP15.58■□□□□ 0.08
LMNB1-203ENST00000460265 DCP1BQ8IZD4 617 aaKnown RBP15.58■□□□□ 0.08
LMNB1-203ENST00000460265 TDRD5Q8NAT2 981 aaKnown RBP15.58■□□□□ 0.08
LMNB1-203ENST00000460265 ZNF398Q8TD17 642 aa15.58■□□□□ 0.08
LMNB1-203ENST00000460265 ILKAPQ9H0C8 392 aaPredicted RBP15.58■□□□□ 0.08
LMNB1-203ENST00000460265 C15orf38-AP3S2A0A0A6YYH1 394 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 I6L893 689 aaPredicted RBP15.57■□□□□ 0.08
LMNB1-203ENST00000460265 SEPT4O43236 478 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 ABCE1P61221 599 aaKnown RBP15.57■□□□□ 0.08
LMNB1-203ENST00000460265 ZNF235Q14590 738 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 MAP3K21Q5TCX8 1036 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 MARC1Q5VT66 337 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 PDPK2PQ6A1A2 396 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 IYDQ6PHW0 289 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 DCLRE1AQ6PJP8 1040 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 ARPINQ7Z6K5 226 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 FBXO27Q8NI29 283 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 DIS3LQ8TF46 1054 aaKnown RBP15.57■□□□□ 0.08
LMNB1-203ENST00000460265 GCNAQ96QF7 691 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 MRPL1Q9BYD6 325 aaKnown RBP15.57■□□□□ 0.08
LMNB1-203ENST00000460265 KANSL3Q9P2N6 904 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 SLC2A6Q9UGQ3 507 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 PARP14Q460N5 1801 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 HMX2A2RU54 273 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 TSPAN3O60637 253 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 STMN1P16949 149 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 PAFAH1B3Q15102 231 aaKnown RBP15.57■□□□□ 0.08
LMNB1-203ENST00000460265 PDSS2Q86YH6 399 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 ULK2Q8IYT8 1036 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 FNDC8Q8TC99 324 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 GDPD5Q8WTR4 605 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 EXOC2Q96KP1 924 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 DSEQ9UL01 958 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 KIAA0100Q14667 2235 aaKnown RBP15.57■□□□□ 0.08
LMNB1-203ENST00000460265 PTPRFP10586 1907 aa15.57■□□□□ 0.08
LMNB1-203ENST00000460265 A0A0U1RQF3 1178 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 HTR3EA5X5Y0 456 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 TRMUO75648 421 aaKnown RBP15.56■□□□□ 0.08
LMNB1-203ENST00000460265 PIGNO95427 931 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 PORP16435 677 aaPredicted RBP15.56■□□□□ 0.08
LMNB1-203ENST00000460265 SCNN1AP37088 669 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 NPY2RP49146 381 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 COPAP53621 1224 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 DPYSQ14117 519 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 C16orf72Q14CZ0 275 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 SAPCD2Q86UD0 394 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms