RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 PLPPR4Q7Z2D5 763 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 MYO1HQ8N1T3 1032 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 RNASE11Q8TAA1 199 aaKnown RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 TNFRSF25Q93038 417 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.86□□□□□ -0.83
UFD1-205ENST00000459854 ARMCX1Q9P291 453 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 NCANO14594 1321 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 DNAJC25-GNG10A0A024R161 153 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 CCDC85CA6NKD9 419 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 PSMD10O75832 226 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 UMPSP11172 480 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 ELK3P41970 407 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 RAB27AP51159 221 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 BEX3Q00994 111 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 AMPD2Q01433 879 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 GHRHRQ02643 423 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 KIAA1841Q6NSI8 718 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 RNF19BQ6ZMZ0 732 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 USP49Q70CQ1 688 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 ZNF222Q9UK12 451 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 GMPPBQ9Y5P6 360 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 F5H423 210 aaPredicted RBP9.85□□□□□ -0.83
UFD1-205ENST00000459854 WWP2O00308 870 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 DNAJA2O60884 412 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 ZNF286BP0CG31 522 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 VDRP11473 427 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 LBPP18428 481 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 RPA3P35244 121 aaPredicted RBP9.85□□□□□ -0.83
UFD1-205ENST00000459854 TIE1P35590 1138 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 MAPKAPK2P49137 400 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 CACNB2Q08289 660 aaPredicted RBP9.85□□□□□ -0.83
UFD1-205ENST00000459854 GRIK3Q13003 919 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 CNPY1Q3B7I2 92 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 IPMKQ8NFU5 416 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 MAGEE2Q8TD90 523 aaPredicted RBP9.85□□□□□ -0.83
UFD1-205ENST00000459854 COPS5Q92905 334 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 KIF12Q96FN5 646 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 CDH19Q9H159 772 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 KCTD10Q9H3F6 313 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 EBF2Q9HAK2 575 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 C12orf4Q9NQ89 552 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 TFR2Q9UP52 801 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 SMPD1P17405 629 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 CHRM3P20309 590 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 CDC25CP30307 473 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 HNRNPH3P31942 346 aaKnown RBP9.85□□□□□ -0.83
UFD1-205ENST00000459854 PLIN5Q00G26 463 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 NRF1Q16656 503 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 ZDHHC17Q8IUH5 632 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 FAM126BQ8IXS8 530 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 TRIB2Q92519 343 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 ITPKCQ96DU7 683 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 MTMR9Q96QG7 549 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 VAT1Q99536 393 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 MAGEL2Q9UJ55 1249 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 SLC22A2O15244 555 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 ATMINO43313 823 aaPredicted RBP9.85□□□□□ -0.83
UFD1-205ENST00000459854 KCNH1O95259 989 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 CLTBP09497 229 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 ITGA4P13612 1032 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 POU1F1P28069 291 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 FLT3P36888 993 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 TMEM132DQ14C87 1099 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 EMC2Q15006 297 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 NIPAL1Q6NVV3 410 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 FRMD7Q6ZUT3 714 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 SENP6Q9GZR1 1112 aaPredicted RBP9.85□□□□□ -0.83
UFD1-205ENST00000459854 SPASTQ9UBP0 616 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 RAP2CQ9Y3L5 183 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 NR2E3Q9Y5X4 410 aa9.85□□□□□ -0.83
UFD1-205ENST00000459854 METTL21EPA6NDL7 271 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 C5orf60A6NFR6 353 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 KPNA3O00505 521 aaPredicted RBP9.84□□□□□ -0.83
UFD1-205ENST00000459854 FYNP06241 537 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 RARAP10276 462 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 PPP3CCP48454 512 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 HARS2P49590 506 aaKnown RBP9.84□□□□□ -0.83
UFD1-205ENST00000459854 AP3S2P59780 193 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 RPS7P62081 194 aaKnown RBP9.84□□□□□ -0.83
UFD1-205ENST00000459854 CXCL17Q6UXB2 119 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 KRT77Q7Z794 578 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 ZNF540Q8NDQ6 660 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 FCGR1BQ92637 280 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 ZFYVE1Q9HBF4 777 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 PCDHGA3Q9Y5H0 932 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 MYH4Q9Y623 1939 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 DHRS12A0PJE2 317 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.84□□□□□ -0.83
UFD1-205ENST00000459854 MDM4O15151 490 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 CRTAMO95727 393 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 CNPP09543 421 aaKnown RBP9.84□□□□□ -0.83
UFD1-205ENST00000459854 THRBP10828 461 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 ATP12AP54707 1039 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 CDH17Q12864 832 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 ANKS6Q68DC2 871 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 TMC7Q7Z402 723 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 SLC44A2Q8IWA5 706 aaPredicted RBP9.84□□□□□ -0.83
UFD1-205ENST00000459854 POU5F2Q8N7G0 328 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 SLC7A14Q8TBB6 771 aa9.84□□□□□ -0.83
UFD1-205ENST00000459854 HELQQ8TDG4 1101 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms