RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CCL26Q9Y258 94 aa5.91□□□□□ -1.46
RNU1-88P-201ENST00000459274 MFHAS1Q9Y4C4 1052 aa5.91□□□□□ -1.46
RNU1-88P-201ENST00000459274 MTCH2Q9Y6C9 303 aa5.91□□□□□ -1.46
RNU1-88P-201ENST00000459274 RPS6KL1Q9Y6S9 549 aa5.91□□□□□ -1.46
RNU1-88P-201ENST00000459274 ATG2AQ2TAZ0 1938 aa5.91□□□□□ -1.46
RNU1-88P-201ENST00000459274 KIF26AQ9ULI4 1882 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 EDDM13A0A1B0GTR0 161 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 FAM237BA0A1B0GVD1 139 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 PABPN1LA6NDY0 278 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 C1QTNF3-AMACRE9PGA6 284 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 I6L893 689 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 NEMP1O14524 444 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MAP2K7O14733 419 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 STX7O15400 261 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 LINC01565O15544 149 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 HOXC11O43248 304 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 CACNG3O60359 315 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 USP1O94782 785 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 TMCC1O94876 653 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SUN1O94901 812 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 PRAMEF12O95522 483 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 NDST3O95803 873 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 GLP2RO95838 553 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MT-CYBP00156 380 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 GSRP00390 522 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 AGTP01019 485 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 PENKP01210 267 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MT-ND3P03897 115 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 PRNPP04156 253 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 DLDP09622 509 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MYBL2P10244 700 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 CYP2A6P11509 494 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 KCNA5P22460 613 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MGAT1P26572 445 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MZF1P28698 734 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SPRP35270 261 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 EIF2DP41214 584 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 GRIA2P42262 883 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 WNT3AP56704 352 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MAXP61244 160 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 DSC2Q02487 901 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MGAT5Q09328 741 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 GRSF1Q12849 480 aaKnown RBP eCLIP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 LMAN2Q12907 356 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 KCNC3Q14003 757 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SPARCL1Q14515 664 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 STARD3Q14849 445 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 GRIN2CQ14957 1233 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 TRADDQ15628 312 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SLC1A5Q15758 541 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 CARD16Q5EG05 197 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 AARS2Q5JTZ9 985 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 PRPF38BQ5VTL8 546 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MRNIPQ6NTE8 343 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 ERAP2Q6P179 960 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 ZNF449Q6P9G9 518 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SYCE2Q6PIF2 218 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 RHBDF2Q6PJF5 856 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 ZDHHC24Q6UX98 284 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SERPINA13PQ6UXR4 307 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 LINGO4Q6UY18 593 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 LEKR1Q6ZMV7 388 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 ARHGAP36Q6ZRI8 547 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 CYS1Q717R9 158 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 GLT6D1Q7Z4J2 308 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SPRED2Q7Z698 418 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 RASSF3Q86WH2 238 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 PLPP6Q8IY26 295 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 APCDD1Q8J025 514 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SH2D3CQ8N5H7 860 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 GLIS1Q8NBF1 620 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 NETO2Q8NC67 525 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 TSEN2Q8NCE0 465 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 OR6P1Q8NGX9 317 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SPATA22Q8NHS9 363 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 UHMK1Q8TAS1 419 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 BRSK1Q8TDC3 778 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 BLOC1S5Q8TDH9 187 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 OR8D1Q8WZ84 308 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 PTPRN2Q92932 1015 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 PEX13Q92968 403 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 TTC17Q96AE7 1141 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 ZNF669Q96BR6 464 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MTBPQ96DY7 904 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MSANTD3Q96H12 275 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 VPS39Q96JC1 886 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 RPL10LQ96L21 214 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 ZSWIM3Q96MP5 696 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 ZIM3Q96PE6 472 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 KXD1Q9BQD3 176 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MGME1Q9BQP7 344 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 HEPHQ9BQS7 1158 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 CPEB1Q9BZB8 566 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 ZDHHC6Q9H6R6 413 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 C8orf33Q9H7E9 229 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 CNOT10Q9H9A5 744 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 KCNK9Q9NPC2 374 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 C20orf96Q9NUD7 363 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 NDFIP2Q9NV92 336 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms