RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TINF2Q9BSI4 451 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 EPHA3P29320 983 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 FBXO48Q5FWF7 155 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 STXBP5Q5T5C0 1151 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 APTXQ7Z2E3 356 aaKnown RBP19.82■□□□□ 0.76
SNX27-204ENST00000458013 DSELQ8IZU8 1212 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.82■□□□□ 0.76
SNX27-204ENST00000458013 TRPV2Q9Y5S1 764 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 GPR1P46091 355 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 TGFB2P61812 414 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 PARP6Q2NL67 630 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 SLC45A4Q5BKX6 768 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 MTX3Q5HYI7 312 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 IRAK1BP1Q5VVH5 260 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 MARCH7Q9H992 704 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 OSER1Q9NX31 292 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 GNPTGQ9UJJ9 305 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 NT5C1B-RDH14C9J2C7 533 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 CAPN15O75808 1086 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 RTN3O95197 1032 aaPredicted RBP19.82■□□□□ 0.76
SNX27-204ENST00000458013 PDK3Q15120 406 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 RBM44Q6ZP01 1051 aaKnown RBP19.82■□□□□ 0.76
SNX27-204ENST00000458013 MYLPFQ96A32 169 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 LGMNQ99538 433 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 PNPOQ9NVS9 261 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 C2CD2Q9Y426 696 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 USP31Q70CQ4 1352 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 ABHD14A-ACY1A0A1B0GW23 586 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 BUD31P41223 144 aaPredicted RBP19.82■□□□□ 0.76
SNX27-204ENST00000458013 ST3GAL1Q11201 340 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 LIASO43766 372 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 VPS4BO75351 444 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 SLC35C1Q96A29 364 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 SNRNP25Q9BV90 132 aaKnown RBP19.81■□□□□ 0.76
SNX27-204ENST00000458013 ABCC13Q9NSE7 274 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 HACD1B0YJ81 288 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 LGALS2P05162 132 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 RNF19BQ6ZMZ0 732 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 CHPFQ8IZ52 775 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 SMYD1Q8NB12 490 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 ELOVL4Q9GZR5 314 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 NFASCO94856 1347 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 A0A1W2PPM1 405 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 PDE2AO00408 941 aaPredicted RBP19.81■□□□□ 0.76
SNX27-204ENST00000458013 PDE9AO76083 593 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 CCNB1P14635 433 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 IRF8Q02556 426 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 NFE2Q16621 373 aaPredicted RBP19.81■□□□□ 0.76
SNX27-204ENST00000458013 FAM220AQ7Z4H9 259 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 PANX3Q96QZ0 392 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 EQTNQ9NQ60 294 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 NDUFS2O75306 463 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 PTDSS1P48651 473 aaKnown RBP19.81■□□□□ 0.76
SNX27-204ENST00000458013 ABATP80404 500 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 ACAT2Q9BWD1 397 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 BLOC1S4Q9NUP1 217 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 CLN6Q9NWW5 311 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 CMTM6Q9NX76 183 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 TFEBP19484 476 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 IFNGR2P38484 337 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 AGMOQ6ZNB7 445 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 POC5Q8NA72 575 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 SUSD6Q92537 303 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 KANSL3Q9P2N6 904 aa19.81■□□□□ 0.76
SNX27-204ENST00000458013 BMP10O95393 424 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 GSTT1P30711 240 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 RRP1BQ14684 758 aaKnown RBP19.8■□□□□ 0.76
SNX27-204ENST00000458013 FAM187BQ17R55 369 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 PCID2Q5JVF3 399 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 ZDHHC17Q8IUH5 632 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 IQCF2Q8IXL9 164 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 PRKD2Q9BZL6 878 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 IKZF4Q9H2S9 585 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 APOC4-APOC2K7ER74 178 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 EPHB6O15197 1021 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 PGK1P00558 417 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 APOC2P02655 101 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 ANXA6P08133 673 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 CLUP10909 449 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 SERPINA4P29622 427 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 CARTPTQ16568 116 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 NEPROQ6NW34 567 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 RCN3Q96D15 328 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 SLC25A23Q9BV35 468 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 MLPHQ9BV36 600 aaPredicted RBP19.8■□□□□ 0.76
SNX27-204ENST00000458013 CLIC5Q9NZA1 410 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 RCCD1A6NED2 376 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 TEX28O15482 410 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 ERAL1O75616 437 aaKnown RBP19.8■□□□□ 0.76
SNX27-204ENST00000458013 NR2F1P10589 423 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 ANPEPP15144 967 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 TRIT1Q9H3H1 467 aaKnown RBP19.8■□□□□ 0.76
SNX27-204ENST00000458013 MFSD1Q9H3U5 465 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 STARD13Q9Y3M8 1113 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 USP4Q13107 963 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 ADHFE1Q8IWW8 467 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 OR52L1Q8NGH7 329 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 OR10H1Q9Y4A9 318 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 DIP2AQ14689 1571 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 CD163L1Q9NR16 1453 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms