RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 CADM4Q8NFZ8 388 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 ACTL9Q8TC94 416 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 HCAR2Q8TDS4 363 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 FAM131CQ96AQ9 280 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 VOPP1Q96AW1 172 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 ARRDC3Q96B67 414 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 HAUS1Q96CS2 278 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 LOXL4Q96JB6 756 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 ZNF641Q96N77 438 aaPredicted RBP18.42■□□□□ 0.54
TRIM13-206ENST00000457662 NUDCD1Q96RS6 583 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 GPR174Q9BXC1 333 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 KDM4CQ9H3R0 1056 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 ATP13A3Q9H7F0 1226 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 NT5MQ9NPB1 228 aa18.42■□□□□ 0.54
TRIM13-206ENST00000457662 SMG5Q9UPR3 1016 aaKnown RBP18.42■□□□□ 0.54
TRIM13-206ENST00000457662 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.41■□□□□ 0.54
TRIM13-206ENST00000457662 LRRC72A6NJI9 287 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 KCNK1O00180 336 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 RNF103O00237 685 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 INSIG1O15503 277 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 SEMA4FO95754 770 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 UGT2B4P06133 528 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 CR2P20023 1033 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 ITKQ08881 620 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 PRKD1Q15139 912 aaPredicted RBP18.41■□□□□ 0.54
TRIM13-206ENST00000457662 NOMO1Q15155 1222 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 LAIR1Q6GTX8 287 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 ZC3H18Q86VM9 953 aaKnown RBP18.41■□□□□ 0.54
TRIM13-206ENST00000457662 TMEFF1Q8IYR6 380 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 OR14C36Q8NHC7 312 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 FOXJ1Q92949 421 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 ZNF419Q96HQ0 510 aaPredicted RBP18.41■□□□□ 0.54
TRIM13-206ENST00000457662 KLHL32Q96NJ5 620 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 IL12RB2Q99665 862 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 POLR1EQ9GZS1 481 aaKnown RBP18.41■□□□□ 0.54
TRIM13-206ENST00000457662 SUV39H2Q9H5I1 410 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 SCUBE2Q9NQ36 999 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 DKK3Q9UBP4 350 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 SDK1Q7Z5N4 2213 aa18.41■□□□□ 0.54
TRIM13-206ENST00000457662 THADAQ6YHU6 1953 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 C16orf96A6NNT2 1141 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 USP27XA6NNY8 438 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 PLK4O00444 970 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 SERPINA4P29622 427 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 NEK3P51956 506 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 OTUD4Q01804 1114 aaKnown RBP18.4■□□□□ 0.54
TRIM13-206ENST00000457662 BCL2L1Q07817 233 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 KLF1Q13351 362 aaPredicted RBP18.4■□□□□ 0.54
TRIM13-206ENST00000457662 LPAL2Q16609 132 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 FBXL19Q6PCT2 694 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 NCEH1Q6PIU2 408 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 OR2T34Q8NGX1 318 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 FERMT1Q9BQL6 677 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 ATP8A1Q9Y2Q0 1164 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 NUMA1Q14980 2115 aa18.4■□□□□ 0.54
TRIM13-206ENST00000457662 METTL12A8MUP2 240 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 H7C0C1 242 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 ATP5OP48047 213 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 DHPSP49366 369 aaPredicted RBP18.39■□□□□ 0.54
TRIM13-206ENST00000457662 ADPRHP54922 357 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 MAXP61244 160 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 TEX44Q53QW1 395 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 SLC45A4Q5BKX6 768 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 PIP5KL1Q5T9C9 394 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 AGBL4Q5VU57 503 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 ALG1LQ6GMV1 187 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 CAMK1DQ8IU85 385 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 SLC35F6Q8N357 371 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 DEFB119Q8N690 84 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 RAB7BQ96AH8 199 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 PHOX2BQ99453 314 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 NOD2Q9HC29 1040 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 KCND1Q9NSA2 647 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 SEPT10Q9P0V9 454 aa18.39■□□□□ 0.54
TRIM13-206ENST00000457662 TBC1D3DA0A087WVF3 549 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TBC1D3IA0A087WXS9 549 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TBC1D3EA0A087X179 549 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TBC1D3KA0A087X1G2 549 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TBC1D3FA6NER0 549 aaPredicted RBP18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TBC1D3LB9A6J9 549 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 PLRG1O43660 514 aaKnown RBP18.39■□□□□ 0.53
TRIM13-206ENST00000457662 ZNF189O75820 626 aaPredicted RBP18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TBC1D3HP0C7X1 549 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 RBP3P10745 1247 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 ADRB3P13945 408 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 EIF3EP60228 445 aaKnown RBP18.39■□□□□ 0.53
TRIM13-206ENST00000457662 SYCP2LQ5T4T6 812 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 CFAP58Q5T655 872 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TBC1D3GQ6DHY5 549 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TBC1D3CQ6IPX1 549 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 BRAT1Q6PJG6 821 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 B4GALNT4Q76KP1 1039 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TTC7BQ86TV6 843 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 SLC13A5Q86YT5 568 aaPredicted RBP18.39■□□□□ 0.53
TRIM13-206ENST00000457662 TBC1D3Q8IZP1 549 aaPredicted RBP18.39■□□□□ 0.53
TRIM13-206ENST00000457662 CNTD1Q8N815 330 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 QKIQ96PU8 341 aaKnown RBP eCLIP18.39■□□□□ 0.53
TRIM13-206ENST00000457662 VAT1Q99536 393 aa18.39■□□□□ 0.53
TRIM13-206ENST00000457662 SEMA3CQ99985 751 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms