RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SWI5Q1ZZU3 235 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 KLHL22Q53GT1 634 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 KDELC2Q7Z4H8 507 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF410Q86VK4 478 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 GPIHBP1Q8IV16 184 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 BTN2A2Q8WVV5 523 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 BIRC8Q96P09 236 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 NUSAP1Q9BXS6 441 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 OR2B2Q9GZK3 357 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 KLHL1Q9NR64 748 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 NDFIP2Q9NV92 336 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 KCNH4Q9UQ05 1017 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 FAM172BPA6NC97 362 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 HS6ST1O60243 411 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 FCER1AP12319 257 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RPL4P36578 427 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SOX9P48436 509 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SLC1A6P48664 564 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF484Q5JVG2 852 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CYB5R4Q7L1T6 521 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RBM12BQ8IXT5 1001 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 PGAM4Q8N0Y7 254 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RC3H2Q9HBD1 1191 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 PCDHGB5Q9Y5G0 923 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ARPC4-TTLL3A0A0A6YYG9 625 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TRAPPC13A5PLN9 417 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RIMBP2O15034 1052 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CLUP10909 449 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 HSD17B2P37059 387 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 MNDAP41218 407 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 HNF4AP41235 474 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 VAC14Q08AM6 782 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 WDR72Q3MJ13 1102 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SLFN11Q7Z7L1 901 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RNF135Q8IUD6 432 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 GPR101Q96P66 508 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 MTMR10Q9NXD2 777 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 NYAP2Q9P242 653 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 NUFIP1Q9UHK0 495 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 DUSP12Q9UNI6 340 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 OTCP00480 354 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 DGKAP23743 735 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CDK8P49336 464 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TRAF2Q12933 501 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 BNIP1Q12981 228 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 PTPAQ15257 358 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ARHGAP15Q53QZ3 475 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 KLHL24Q6TFL4 600 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 USP43Q70EL4 1123 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 PARP8Q8N3A8 854 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CIDECQ96AQ7 238 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CENPNQ96H22 339 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 MED28Q9H204 178 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TUBB1Q9H4B7 451 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RAB9BQ9NP90 201 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ABI2Q9NYB9 513 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 UXTQ9UBK9 157 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RAP2CQ9Y3L5 183 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SLC28A2O43868 658 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TM7SF2O76062 418 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 FGF19O95750 216 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 VDRP11473 427 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 GCLMP48507 274 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CPT1AP50416 773 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF33AQ06730 810 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 NFYCQ13952 458 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 PTAR1Q7Z6K3 402 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF669Q96BR6 464 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SYT4Q9H2B2 425 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TRPV5Q9NQA5 729 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 C1orf109Q9NX04 203 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF646O15015 1829 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 SLC30A4O14863 429 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 RIPK2O43353 540 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 COMTP21964 271 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 NTSP30990 170 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 GSTM5P46439 218 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ALDH3A2P51648 485 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TWF1Q12792 350 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 RHEBQ15382 184 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 GDPGP1Q6ZNW5 385 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF767PQ75MW2 155 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 UNC93AQ86WB7 457 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 DNERQ8NFT8 737 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TMEM120AQ9BXJ8 343 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 EXD2Q9NVH0 621 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CRLS1Q9UJA2 301 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 MCM8Q9UJA3 840 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ATG4BQ9Y4P1 393 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 MAST2Q6P0Q8 1798 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 KMT2EQ8IZD2 1858 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TFECO14948 347 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 H6PDO95479 791 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 GSTM3P21266 225 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 MTDHQ86UE4 582 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CLPTM1LQ96KA5 538 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 LGALS13Q9UHV8 139 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF214Q9UL59 606 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 NPHP3-ACAD11A0A0J9YXS1 232 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CABYRO75952 493 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms