RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 HNRNPA1L2Q32P51 320 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 ACCSLQ4AC99 568 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 HSP90AA4PQ58FG1 418 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 PRAMEF13Q5VWM6 474 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF776Q68DI1 518 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 KIAA0895LQ68EN5 471 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3GQ6DHY5 549 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 OR6B2Q6IFH4 312 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3CQ6IPX1 549 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 FBXL22Q6P050 247 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TRIM65Q6PJ69 517 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 IL27RAQ6UWB1 636 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 LRSAM1Q6UWE0 723 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 NLRC3Q7RTR2 1065 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 ADAT2Q7Z6V5 191 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 C14orf80Q86SX3 495 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CHSY1Q86X52 802 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 IRF2BP1Q8IU81 584 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CCDC117Q8IWD4 279 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 ELOA2Q8IYF1 753 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 PHACTR4Q8IZ21 702 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3Q8IZP1 549 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CCAR2Q8N163 923 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 AADATQ8N5Z0 425 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 HJURPQ8NCD3 748 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 OR14C36Q8NHC7 312 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 FBLIM1Q8WUP2 373 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 IGSF8Q969P0 613 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 SERPINB11Q96P15 392 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CPXM1Q96SM3 734 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 PRMT1Q99873 361 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 DDX50Q9BQ39 737 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 SIK2Q9H0K1 926 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 OSBPL2Q9H1P3 480 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 PABPC3Q9H361 631 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 THAP9Q9H5L6 903 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 SGK2Q9HBY8 427 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 ANLNQ9NQW6 1124 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 AASDHPPTQ9NRN7 309 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 AJAP1Q9UKB5 411 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 SARDHQ9UL12 918 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CNTN6Q9UQ52 1028 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 APOBEC2Q9Y235 224 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 NCKAP1Q9Y2A7 1128 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CA5BQ9Y2D0 317 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 NFE2L3Q9Y4A8 694 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 SNX10Q9Y5X0 201 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 EDDM13A0A1B0GTR0 161 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 TARSL2A2RTX5 802 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 TYW5A2RUC4 315 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 TMEM8BA6NDV4 472 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 TRABD2BA6NFA1 517 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 KCNU1A8MYU2 1149 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 F5H5T6 163 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 M0QYT0 321 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 FLRT2O43155 660 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 KLF4O43474 513 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 MED7O43513 233 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 RNASEH1O60930 286 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 RTN2O75298 545 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 CNTN5O94779 1100 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ENDOD1O94919 500 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 MOCS3O95396 460 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 GNA14O95837 355 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 MT-CO1P00395 513 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 IGLV3-25P01717 112 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 APOEP02649 317 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ASLP04424 464 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ERBB2P04626 1255 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 SRPRAP08240 638 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF883P0CG24 379 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 GOT1P17174 413 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ABCB4P21439 1286 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 PPP1R2P41236 205 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 CTSKP43235 329 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 C21orf59P57076 290 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 CDK17Q00537 523 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 NRG1Q02297 640 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 ZBTB16Q05516 673 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 CYP4F3Q08477 520 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 KCNMA1Q12791 1236 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 DNAJC3Q13217 504 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 PDCLQ13371 301 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 EIF4EBP2Q13542 120 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 AUHQ13825 339 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 SLBPQ14493 270 aaKnown RBP eCLIP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 SHBQ15464 509 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 EXOC3L4Q17RC7 722 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 TTC31Q49AM3 519 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 C2CD6Q53TS8 623 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 RNF219Q5W0B1 726 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 CXorf57Q6NSI4 855 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 DHRS13Q6UX07 377 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 GBP6Q6ZN66 633 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM183BPQ6ZVS7 135 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 USP30Q70CQ3 517 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 TMPRSS7Q7RTY8 843 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 PHLDB2Q86SQ0 1253 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 GLRX5Q86SX6 157 aa4.82□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC47A2Q86VL8 602 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms