RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 EBAG9O00559 213 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 NDUFAB1O14561 156 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 COPEO14579 308 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 TGDSO95455 350 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 GSRP00390 522 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 ASLP04424 464 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 MMP2P08253 660 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 KRT4P19013 534 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 OGNP20774 298 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 CRABP2P29373 138 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 BMP8BP34820 402 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 ATP1A2P50993 1020 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 HK2P52789 917 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 NRLP54845 237 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 ASPHQ12797 758 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 GPM6BQ13491 265 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 CDH18Q13634 790 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 DUSP6Q16828 381 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 TEDDM1Q5T9Z0 273 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 COL13A1Q5TAT6 717 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 ZDHHC20Q5W0Z9 365 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 KIAA0907Q7Z7F0 614 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 KCNMB4Q86W47 210 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 RASSF3Q86WH2 238 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 MFN1Q8IWA4 741 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 TP53INP2Q8IXH6 220 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 CYP4X1Q8N118 509 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 CELF5Q8N6W0 485 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 GBP7Q8N8V2 638 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 TDRD5Q8NAT2 981 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 UHMK1Q8TAS1 419 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 DTX3LQ8TDB6 740 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 BCAS4Q8TDM0 211 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 ZNF669Q96BR6 464 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 PABPC5Q96DU9 382 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 ALG14Q96F25 216 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 LRIG1Q96JA1 1093 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 CCT8L2Q96SF2 557 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 FICDQ9BVA6 458 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 MUC3BQ9H195 1237 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 MFSD1Q9H3U5 465 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 POPDC3Q9HBV1 291 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 ABCB8Q9NUT2 735 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 TDP1Q9NUW8 608 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 GDE1Q9NZC3 331 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 STARD13Q9Y3M8 1113 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 NOTCH4Q99466 2003 aa6.91□□□□□ -1.3
ECHDC1-210ENST00000454859 TRIM49D1C9J1S8 452 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 J3KR12 359 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 GRM6O15303 877 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 TBL1XO60907 577 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 RHOP08100 348 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 PPARGP37231 505 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 GRIA4P48058 902 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 CLCN5P51795 746 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 POU4F1Q01851 419 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 GUCY1A3Q02108 690 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 MSLNQ13421 630 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 THOC5Q13769 683 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 TAF1AQ15573 450 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 ZSCAN26Q16670 478 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 TSNAXIP1Q2TAA8 658 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 TSTD2Q5T7W7 516 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 GPR158Q5T848 1215 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 RNF187Q5TA31 235 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 PLPP4Q5VZY2 271 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 RNF219Q5W0B1 726 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 ATG16L1Q676U5 607 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 ARHGAP36Q6ZRI8 547 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 ZNF771Q7L3S4 317 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 OTOP3Q7RTS5 596 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 PIGWQ7Z7B1 504 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 ZNF354CQ86Y25 554 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 IPMKQ8NFU5 416 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 VN1R2Q8NFZ6 395 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 SHKBP1Q8TBC3 707 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 TRIB3Q96RU7 358 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 GPR22Q99680 433 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 SEMA3CQ99985 751 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 CORO1BQ9BR76 489 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 CPEB1Q9BZB8 566 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 SCUBE2Q9NQ36 999 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 INTS10Q9NVR2 710 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 CFAP97Q9P2B7 532 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 HS3ST2Q9Y278 367 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 PLLPQ9Y342 182 aa6.9□□□□□ -1.3
ECHDC1-210ENST00000454859 A0A087X1B8 175 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 GOLGA6L7A0A1B0GV03 622 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 GOLGA8CPA6NN73 597 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 C2orf81A6NN90 581 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 H7C0S8 307 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 RFPL1O75677 317 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 ITGA2BP08514 1039 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 GRK2P25098 689 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 ALDH3A1P30838 453 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 CD86P42081 329 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 GRIA1P42261 906 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 ARCN1P48444 511 aaKnown RBP6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 CSRP3P50461 194 aa6.9□□□□□ -1.31
ECHDC1-210ENST00000454859 SUOXP51687 545 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms