RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 BTBD8Q5XKL5 378 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 ESRP1Q6NXG1 681 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 ARHGAP36Q6ZRI8 547 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 RAPH1Q70E73 1250 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 SLC41A1Q8IVJ1 513 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 PELI3Q8N2H9 469 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 TEX26Q8N6G2 289 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 PEX13Q92968 403 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 IMP4Q96G21 291 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 FUBP3Q96I24 572 aaKnown RBP eCLIP12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 FCRL2Q96LA5 508 aaPredicted RBP12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 SERPINB11Q96P15 392 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 AGO3Q9H9G7 860 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 ZBTB26Q9HCK0 441 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 TRPC7Q9HCX4 862 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 PRDM5Q9NQX1 630 aaPredicted RBP12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 UTP6Q9NYH9 597 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 IL37Q9NZH6 218 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 ZDHHC2Q9UIJ5 367 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 FBXO5Q9UKT4 447 aa12.66□□□□□ -0.38
ECHDC1-209ENST00000454591 IGLV3-10A0A075B6K4 115 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 MYADML2A6NDP7 307 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 E9PAM4 449 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 DFFAO00273 331 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 PHGDHO43175 533 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 MGEA5O60502 916 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 VAPBO95292 243 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 MT-CYBP00156 380 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 UQCRBP14927 111 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 HOXB8P17481 243 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 ABCG1P45844 678 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 LEPRP48357 1165 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 SLC5A3P53794 718 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 EPHB1P54762 984 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 NAGLUP54802 743 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 INHBCP55103 352 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 CYLC2Q14093 348 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 BTG3Q14201 252 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 GRM2Q14416 872 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 ZNF423Q2M1K9 1284 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 TECRLQ5HYJ1 363 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 RWDD4Q6NW29 188 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 SDCCAG8Q86SQ7 713 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 CEP97Q8IW35 865 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 ARHGAP18Q8N392 663 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 SLC25A41Q8N5S1 370 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 TRPV1Q8NER1 839 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 SHKBP1Q8TBC3 707 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 DLG3Q92796 817 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 CASP10Q92851 521 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 NXNL1Q96CM4 212 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 TSPAN17Q96FV3 270 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 NOL6Q9H6R4 1146 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 IGSF5Q9NSI5 407 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 UBP1Q9NZI7 540 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 NCKIPSDQ9NZQ3 722 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 CPSF2Q9P2I0 782 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 XPR1Q9UBH6 696 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 ADAMTS6Q9UKP5 1117 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 RIMKLBQ9ULI2 386 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 PADI3Q9ULW8 664 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 SCML2Q9UQR0 700 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 TLR6Q9Y2C9 796 aa12.65□□□□□ -0.38
ECHDC1-209ENST00000454591 E2F8A0AVK6 867 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 SDHDO14521 159 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 SLC7A4O43246 635 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 PDE5AO76074 875 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 B3GAT3O94766 335 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 BAG2O95816 211 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 RBP1P09455 135 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 RHOQP17081 205 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 BRCC3P46736 316 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 TAS2R39P59534 338 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 ACVR1Q04771 509 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 TAF1CQ15572 869 aaPredicted RBP12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 IRAK1BP1Q5VVH5 260 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 NEPROQ6NW34 567 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 BNC2Q6ZN30 1099 aaPredicted RBP12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 MON1AQ86VX9 555 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 SNX32Q86XE0 403 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 HPS6Q86YV9 775 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 TICAM1Q8IUC6 712 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 DSELQ8IZU8 1212 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 CATSPER1Q8NEC5 780 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 IPMKQ8NFU5 416 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 CEP70Q8NHQ1 597 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 SLC26A7Q8TE54 656 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 USP33Q8TEY7 942 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 PYDC1Q8WXC3 89 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 TOP1MTQ969P6 601 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 SCYL1Q96KG9 808 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 UBXN10Q96LJ8 280 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 C8orf48Q96LL4 319 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 TRMOQ9BU70 441 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 MAN1C1Q9NR34 630 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 RBM22Q9NW64 420 aaKnown RBP eCLIP12.64□□□□□ -0.397e-6■■■■□ 24.6
ECHDC1-209ENST00000454591 TMEM248Q9NWD8 314 aa12.64□□□□□ -0.39
ECHDC1-209ENST00000454591 SARDHQ9UL12 918 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms