RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 FBXO38Q6PIJ6 1188 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 CAND1Q86VP6 1230 aaKnown RBP11.13□□□□□ -0.63
SCN9A-205ENST00000454569 ADHFE1Q8IWW8 467 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 PPIL6Q8IXY8 311 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 CHST14Q8NCH0 376 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 CSGALNACT1Q8TDX6 532 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 RUBCNQ92622 972 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 LRRC45Q96CN5 670 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 MRGPRX2Q96LB1 330 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 WDR83Q9BRX9 315 aaKnown RBP11.13□□□□□ -0.63
SCN9A-205ENST00000454569 CINPQ9BW66 212 aaPredicted RBP11.13□□□□□ -0.63
SCN9A-205ENST00000454569 SLC25A51Q9H1U9 297 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 FAM114A2Q9NRY5 505 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 SEPT3Q9UH03 358 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 EVLQ9UI08 416 aaPredicted RBP11.13□□□□□ -0.63
SCN9A-205ENST00000454569 PIAS3Q9Y6X2 628 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 TBC1D3BA6NDS4 549 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 BNIP3LO60238 219 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 PMPCBO75439 489 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 STK10O94804 968 aaKnown RBP11.12□□□□□ -0.63
SCN9A-205ENST00000454569 EGFP01133 1207 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 DLDP09622 509 aaKnown RBP11.12□□□□□ -0.63
SCN9A-205ENST00000454569 H2AFXP16104 143 aaPredicted RBP11.12□□□□□ -0.63
SCN9A-205ENST00000454569 TNFRSF8P28908 595 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 ADRA1AP35348 466 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 ACTN2P35609 894 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 CHRNA4P43681 627 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 RHOAP61586 193 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 TDGQ13569 410 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 HLTFQ14527 1009 aaKnown RBP eCLIP11.12□□□□□ -0.633e-12■■□□□ 11.6
SCN9A-205ENST00000454569 DMC1Q14565 340 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 ZNF234Q14588 700 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 RFTN1Q14699 578 aaPredicted RBP11.12□□□□□ -0.63
SCN9A-205ENST00000454569 PCSK7Q16549 785 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 PUS10Q3MIT2 529 aaKnown RBP11.12□□□□□ -0.63
SCN9A-205ENST00000454569 ALG1LQ6GMV1 187 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 DENND5AQ6IQ26 1287 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 C22orf39Q6P5X5 142 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 Q6ZVU0 165 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 MICALCLQ6ZW33 695 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 NSMCE1Q8WV22 266 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 PTPRN2Q92932 1015 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 P2RY13Q9BPV8 354 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 TRPV5Q9NQA5 729 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 POLR3BQ9NW08 1133 aaPredicted RBP11.12□□□□□ -0.63
SCN9A-205ENST00000454569 THEGQ9P2T0 379 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 PCDHGC4Q9Y5F7 938 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 NUMA1Q14980 2115 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 A0A0C4DFX4 3053 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 MUC3AQ02505 3323 aa11.12□□□□□ -0.63
SCN9A-205ENST00000454569 A0A0U1RQS6 177 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 ATP9BO43861 1147 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 PIGNO95427 931 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 PRLP01236 227 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 PDHA1P08559 390 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 FDFT1P37268 417 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 EIF2DP41214 584 aaKnown RBP11.11□□□□□ -0.63
SCN9A-205ENST00000454569 IL12RB1P42701 662 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 WASP42768 502 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 KIR2DL1P43626 348 aaPredicted RBP11.11□□□□□ -0.63
SCN9A-205ENST00000454569 SEC13P55735 322 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 WNT3AP56704 352 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 TRAF2Q12933 501 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 FASTKD3Q14CZ7 662 aaKnown RBP11.11□□□□□ -0.63
SCN9A-205ENST00000454569 MORF4L2Q15014 288 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 BRD3Q15059 726 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 ACCSLQ4AC99 568 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 SLC44A4Q53GD3 710 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 ITPRIPL1Q6GPH6 555 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 NCEH1Q6PIU2 408 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 DPY19L3Q6ZPD9 716 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 SRLQ86TD4 932 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 IGDCC3Q8IVU1 814 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 MPP5Q8N3R9 675 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 IPMKQ8NFU5 416 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 OR52K1Q8NGK4 314 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 OR2A12Q8NGT7 310 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 CCHCR1Q8TD31 782 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 WFIKKN2Q8TEU8 576 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 AENQ8WTP8 325 aaKnown RBP11.11□□□□□ -0.63
SCN9A-205ENST00000454569 FERMT1Q9BQL6 677 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 TRIM56Q9BRZ2 755 aaKnown RBP11.11□□□□□ -0.63
SCN9A-205ENST00000454569 POLR1EQ9GZS1 481 aaKnown RBP11.11□□□□□ -0.63
SCN9A-205ENST00000454569 SLC25A13Q9UJS0 675 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 SCN8AQ9UQD0 1980 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 CCDC151A5D8V7 595 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 ERLIN1O75477 346 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 NEBLO76041 1014 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 AP2A1O95782 977 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 APODP05090 189 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 SRFP11831 508 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 TPH1P17752 444 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 TPSB2P20231 275 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 PRKCHP24723 683 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 GRIA2P42262 883 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 METAP1P53582 386 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 CRADDP78560 199 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 SULT2A1Q06520 285 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 SLC20A2Q08357 652 aa11.11□□□□□ -0.63
SCN9A-205ENST00000454569 NSUN2Q08J23 767 aaKnown RBP eCLIP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms