RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 RHOAP61586 193 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 SLC25A11Q02978 314 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 PIGHQ14442 188 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 STAT4Q14765 748 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 SLC45A4Q5BKX6 768 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 GDPD4Q6W3E5 623 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 POLNQ7Z5Q5 900 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 GLRX5Q86SX6 157 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 IQCHQ86VS3 1027 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 CHCHD4Q8N4Q1 142 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 NIPA2Q8N8Q9 360 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 PNPLA1Q8N8W4 532 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 OR8K1Q8NGG5 319 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 SAP25Q8TEE9 199 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 HSPH1Q92598 858 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 GDAP1L1Q96MZ0 367 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 CHP1Q99653 195 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 NCAPGQ9BPX3 1015 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 SCNM1Q9BWG6 230 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 TOR4AQ9NXH8 423 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 UBA2Q9UBT2 640 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 IP6K2Q9UHH9 426 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 ANAPC7Q9UJX3 599 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 ITM2BQ9Y287 266 aa12.52□□□□□ -0.41
CSNK1E-211ENST00000451964 ASPMQ8IZT6 3477 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 AREL1O15033 823 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 RAD51BO15315 384 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 DFNA5O60443 496 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 BUB1BO60566 1050 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 IGSF6O95976 241 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 PAK4O96013 591 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 ATXN1LP0C7T5 689 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 FTH1P19P0C7X4 201 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 TIMP2P16035 220 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 IL4RP24394 825 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 RXRGP48443 463 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 ADKP55263 362 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 RPS21P63220 83 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 BNIP3Q12983 259 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 MAPK8IP2Q13387 824 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 SLC18A3Q16572 532 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 GCNT7Q6ZNI0 430 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 TSEN2Q8NCE0 465 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 TSC1Q92574 1164 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 KLHDC7BQ96G42 594 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 FEM1CQ96JP0 617 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 BMFQ96LC9 184 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 NSMCE3Q96MG7 304 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 CSPG4P5Q96PW8 444 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 C1QTNF2Q9BXJ5 285 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 OSBPL1AQ9BXW6 950 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 SLC17A9Q9BYT1 436 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 ERVMER34-1Q9H9K5 563 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 PCDH18Q9HCL0 1135 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 DONSONQ9NYP3 566 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
CSNK1E-211ENST00000451964 CHD5Q8TDI0 1954 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 IGLON5A6NGN9 336 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 ARHGAP42A6NI28 874 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 H3BRJ5 948 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 MYO1FO00160 1098 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 DFFAO00273 331 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 MUSKO15146 869 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 TSPAN6O43657 245 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 PIGNO95427 931 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 CD48P09326 243 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 THEGLP0DJG4 465 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 HNRNPA2B1P22626 353 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 EPHA8P29322 1005 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 AKT2P31751 481 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 GRK6P43250 576 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 ARSEP51690 589 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 ZNF135P52742 658 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 OVGP1Q12889 678 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 ATP13A4Q4VNC1 1196 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 KIAA1161Q6NSJ0 714 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 KDM7AQ6ZMT4 941 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 KANSL1Q7Z3B3 1105 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 RAB44Q7Z6P3 723 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 ABI3BPQ7Z7G0 1075 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 TTC7BQ86TV6 843 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 OR13H1Q8NG92 308 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 ZNF564Q8TBZ8 553 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 TEKT4Q8WW24 435 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 RAB7BQ96AH8 199 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 KLF6Q99612 283 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 CPEB1Q9BZB8 566 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 DKK3Q9UBP4 350 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 IPO11Q9UI26 975 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 KLK13Q9UKR3 277 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 PLXNA2O75051 1894 aa12.5□□□□□ -0.41
CSNK1E-211ENST00000451964 NYNRINQ9P2P1 1898 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-211ENST00000451964 SSU72P8A0A1W2PR75 194 aa12.49□□□□□ -0.41
CSNK1E-211ENST00000451964 POM121BA6NF01 834 aa12.49□□□□□ -0.41
CSNK1E-211ENST00000451964 MFAP3LO75121 409 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms