RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CDK18Q07002 472 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 KCNC3Q14003 757 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 ZNF77Q15935 545 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 SIRPB2Q5JXA9 342 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 RASSF3Q86WH2 238 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 C4orf33Q8N1A6 199 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 SLC25A41Q8N5S1 370 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 ATXN2LQ8WWM7 1075 aaKnown RBP14.42□□□□□ -0.1
USP39-207ENST00000450066 ACDQ96AP0 544 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 ALKBH8Q96BT7 664 aaKnown RBP14.42□□□□□ -0.1
USP39-207ENST00000450066 IFT43Q96FT9 208 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 RANBP9Q96S59 729 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 CDCA3Q99618 268 aaPredicted RBP14.42□□□□□ -0.1
USP39-207ENST00000450066 SFXN1Q9H9B4 322 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 NOD2Q9HC29 1040 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 NKIRAS1Q9NYS0 192 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 PLK2Q9NYY3 685 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 TBC1D14Q9P2M4 693 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 INSIG1O15503 277 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 TYROBPO43914 113 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 TMCC1O94876 653 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 ATXN1LP0C7T5 689 aaKnown RBP14.42□□□□□ -0.1
USP39-207ENST00000450066 HLA-DPA1P20036 260 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 NSUN2Q08J23 767 aaKnown RBP eCLIP14.42□□□□□ -0.1
USP39-207ENST00000450066 USP4Q13107 963 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 MSLNQ13421 630 aaPredicted RBP14.42□□□□□ -0.1
USP39-207ENST00000450066 RETSATQ6NUM9 610 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 LINGO4Q6UY18 593 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 ARID3BQ8IVW6 561 aaPredicted RBP14.42□□□□□ -0.1
USP39-207ENST00000450066 C12orf76Q8N812 135 aaPredicted RBP14.42□□□□□ -0.1
USP39-207ENST00000450066 ZNF778Q96MU6 729 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 NUDCD1Q96RS6 583 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 CLEC4EQ9ULY5 219 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 HEATR9A2RTY3 570 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 TRIM49D1C9J1S8 452 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 PENKP01210 267 aaPredicted RBP14.41□□□□□ -0.1
USP39-207ENST00000450066 WEE1P30291 646 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 RGRP47804 291 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 SCNN1BP51168 640 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 PLK1P53350 603 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 LMAN2Q12907 356 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 SLC12A1Q13621 1099 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 PDPK2PQ6A1A2 396 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 TMC5Q6UXY8 1006 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 PACS1Q6VY07 963 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 SH2D5Q6ZV89 423 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 KCNMB4Q86W47 210 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 TMEM25Q86YD3 366 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 APCDD1Q8J025 514 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 VN1R2Q8NFZ6 395 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 ITFG1Q8TB96 612 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 ING5Q8WYH8 240 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 OTUB2Q96DC9 234 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 SGSM3Q96HU1 749 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 SERAC1Q96JX3 654 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 CPNE1Q99829 537 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 EPN3Q9H201 632 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 SCUBE2Q9NQ36 999 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 C20orf96Q9NUD7 363 aaPredicted RBP14.41□□□□□ -0.1
USP39-207ENST00000450066 IL1RAPL1Q9NZN1 696 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 ARIH1Q9Y4X5 557 aaPredicted RBP14.41□□□□□ -0.1
USP39-207ENST00000450066 ATG2AQ2TAZ0 1938 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 PDE4DIPQ5VU43 2346 aa14.41□□□□□ -0.1
USP39-207ENST00000450066 CXorf51AA0A1B0GTR3 108 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 HMX2A2RU54 273 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 EPOPA6NHQ4 379 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 SPAG7O75391 227 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 FGF1P05230 155 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 DNAJC3Q13217 504 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 CBX2Q14781 532 aaPredicted RBP14.4□□□□□ -0.1
USP39-207ENST00000450066 HSP90AA5PQ58FG0 334 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 TEDDM1Q5T9Z0 273 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 ANKRD42Q8N9B4 389 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 BANPQ8N9N5 519 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 IRF7Q92985 503 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 EXOC2Q96KP1 924 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 LMLNQ96KR4 655 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 TRIB3Q96RU7 358 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 CCDC134Q9H6E4 229 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 TREX1Q9NSU2 369 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 DZANK1Q9NVP4 752 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 TXNDC16Q9P2K2 825 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 SLC17A6Q9P2U8 582 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 PSAT1Q9Y617 370 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 PAPSS2O95340 614 aaPredicted RBP14.4□□□□□ -0.1
USP39-207ENST00000450066 NDST3O95803 873 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 CA4P22748 312 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 CD70P32970 193 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 GP5P40197 560 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 SLC18A2Q05940 514 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 PLEKHG6Q3KR16 790 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 RALGPS1Q5JS13 557 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 TIFABQ6ZNK6 161 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 METTL3Q86U44 580 aaKnown RBP14.4□□□□□ -0.1
USP39-207ENST00000450066 CELF5Q8N6W0 485 aaKnown RBP14.4□□□□□ -0.1
USP39-207ENST00000450066 KIAA1958Q8N8K9 716 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 MGARPQ8TDB4 240 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 DENND1AQ8TEH3 1009 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 SPHK2Q9NRA0 654 aa14.4□□□□□ -0.1
USP39-207ENST00000450066 LHX3Q9UBR4 397 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms