RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CCND1P24385 295 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 RPS9P46781 194 aaKnown RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 PXNP49023 591 aaPredicted RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 CARSP49589 748 aaKnown RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 RPS6KA3P51812 740 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 GUCY2DQ02846 1103 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 LRRC32Q14392 662 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 ITIH4Q14624 930 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 EIF4HQ15056 248 aaKnown RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 PAFAH1B3Q15102 231 aaKnown RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 ACCSLQ4AC99 568 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 FBXO43Q4G163 708 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 FNDC3BQ53EP0 1204 aaKnown RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 SERPINA13PQ6UXR4 307 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 CACUL1Q86Y37 369 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 STAMBPL1Q96FJ0 436 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 THOC1Q96FV9 657 aaKnown RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 C10orf88Q9H8K7 445 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 FCF1Q9Y324 198 aaKnown RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 CEP192Q8TEP8 1941 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 EME2A4GXA9 379 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 NCAM2O15394 837 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 KDELR3O43731 214 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 GJB3O75712 270 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 ATP5BP06576 529 aaKnown RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 NTSR1P30989 418 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 ZNF135P52742 658 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 NDST2P52849 883 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 MRPS21P82921 87 aaKnown RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 ENPP2Q13822 863 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 DMC1Q14565 340 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 RPS6KA1Q15418 735 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 TMEM31Q5JXX7 168 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 ADAT2Q7Z6V5 191 aaKnown RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 MAML2Q8IZL2 1156 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 KIRREL3Q8IZU9 778 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 SPDYE1Q8NFV5 336 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 FRS2Q8WU20 508 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 CENPTQ96BT3 561 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 LGMNQ99538 433 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 OSBPL8Q9BZF1 889 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 TNKS2Q9H2K2 1166 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 PDFQ9HBH1 243 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 MMP17Q9ULZ9 603 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 PLA2G4CQ9UP65 541 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 SPAG17Q6Q759 2223 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 PRR33A8MZF0 331 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 MIF4GDA9UHW6 222 aaKnown RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 KCNK3O14649 394 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 APOL1O14791 398 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 BNIP3LO60238 219 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 MAFKO60675 156 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 PEX11BO96011 259 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 EPHX1P07099 455 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 FAM153BP0C7A2 387 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 OXCT1P55809 520 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 YBEYP58557 167 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 DMWDQ09019 674 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 CUL1Q13616 776 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 DLG2Q15700 870 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 CRY1Q16526 586 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 PARP15Q460N3 678 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 FAM153CQ494X1 144 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 SLC30A9Q6PML9 568 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 ZNF783Q6ZMS7 281 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 NUDT18Q6ZVK8 323 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 Q6ZVU0 165 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 UBL4BQ8N7F7 174 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 ZNF557Q8N988 423 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 ATP11CQ8NB49 1132 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 PTPRN2Q92932 1015 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 RBM41Q96IZ5 413 aaKnown RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 HHIPQ96QV1 700 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 PAIP2Q9BPZ3 127 aaKnown RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 C2orf49Q9BVC5 232 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 CD93Q9NPY3 652 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 SPATA6Q9NWH7 488 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 FAM153AQ9UHL3 310 aa10.01□□□□□ -0.81
CCDC171-203ENST00000449575 IPO11Q9UI26 975 aaKnown RBP10.01□□□□□ -0.81
CCDC171-203ENST00000449575 MUC6Q6W4X9 2439 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 TTC24A2A3L6 582 aaPredicted RBP10□□□□□ -0.81
CCDC171-203ENST00000449575 CHURC1-FNTBB4DL54 471 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 HOXB2P14652 356 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 ETFBP38117 255 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 LMNB2Q03252 620 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 BLMHQ13867 455 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 QPCTQ16769 361 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 SYNPOQ8N3V7 929 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 TRAF3IP1Q8TDR0 691 aaPredicted RBP10□□□□□ -0.81
CCDC171-203ENST00000449575 UCMAQ8WVF2 138 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 ACDQ96AP0 544 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 VOPP1Q96AW1 172 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 CHMP6Q96FZ7 201 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 EXOC2Q96KP1 924 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 GABRG3Q99928 467 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 MAK16Q9BXY0 300 aaKnown RBP10□□□□□ -0.81
CCDC171-203ENST00000449575 TM6SF2Q9BZW4 377 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 MKRN2Q9H000 416 aaKnown RBP10□□□□□ -0.81
CCDC171-203ENST00000449575 RETREG1Q9H6L5 497 aa10□□□□□ -0.81
CCDC171-203ENST00000449575 SMARCAL1Q9NZC9 954 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms