RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 GGT5P36269 586 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 MYBPC1Q00872 1141 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 VAC14Q08AM6 782 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 TAF2Q6P1X5 1199 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 C15orf52Q6ZUT6 534 aaKnown RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 AHI1Q8N157 1196 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 FNDC5Q8NAU1 212 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 FNIP1Q8TF40 1166 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 C18orf25Q96B23 403 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 WDR83Q9BRX9 315 aaKnown RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 NTPCRQ9BSD7 190 aaKnown RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 APOL5Q9BWW9 433 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 DPEP3Q9H4B8 488 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 TRIM39Q9HCM9 518 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 MYOZ2Q9NPC6 264 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 POLE4Q9NR33 117 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 DNAJB4Q9UDY4 337 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 BLOC1S6Q9UL45 172 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 EFR3BQ9Y2G0 817 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 KPNA4O00629 521 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 KLF11O14901 512 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 RHOBTB1O94844 696 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 LYPLA2O95372 231 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 NADKO95544 446 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 TSHRP16473 764 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 ITGB6P18564 788 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 HOXA10P31260 410 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 CCR1P32246 355 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 GPD2P43304 727 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 IREB2P48200 963 aaKnown RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 SERPINB10P48595 397 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 NDUFV1P49821 464 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 TPTEP56180 551 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 FRG1Q14331 258 aaKnown RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 CROCCQ5TZA2 2017 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 ESRP1Q6NXG1 681 aaKnown RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 UGT2A3Q6UWM9 527 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 ERO1BQ86YB8 467 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 OR10Q1Q8NGQ4 319 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 APBB2Q92870 758 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 ZNF778Q96MU6 729 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 HAPLN2Q9GZV7 340 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 NDFIP2Q9NV92 336 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 CACNG4Q9UBN1 327 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 VTI1BQ9UEU0 232 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 SLC8A2Q9UPR5 921 aa12.52□□□□□ -0.41
UBE3B-204ENST00000449510 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 A0A0J9YYE9 177 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 TAF4O00268 1085 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 APOA1P02647 267 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 CTSHP09668 335 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ZNF37AP17032 561 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 CDH2P19022 906 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 NDST2P52849 883 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 SP2Q02086 613 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ABHD15Q6UXT9 468 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ERI1Q8IV48 349 aaKnown RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 POC5Q8NA72 575 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 PCDHGC3Q9UN70 934 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 CABYRO75952 493 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 NR2C2P49116 596 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 CYP4F2P78329 520 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 CYP4F3Q08477 520 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 IKBKEQ14164 716 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 CRY2Q49AN0 593 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 FGD3Q5JSP0 725 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ARHGAP36Q6ZRI8 547 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 CUZD1Q86UP6 607 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 MIB1Q86YT6 1006 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 CPNE9Q8IYJ1 553 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ZBTB8BQ8NAP8 495 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 PSD4Q8NDX1 1056 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 SMAD5Q99717 465 aaKnown RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 C1orf21Q9H246 121 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 RIBC2Q9H4K1 309 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 DHX33Q9H6R0 707 aaKnown RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ZMYM5Q9UJ78 669 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ASB14A6NK59 587 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 FAM159BA6NKW6 160 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 GNAO1P09471 354 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 IMPDH2P12268 514 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 CHRNA4P43681 627 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ASPAP45381 313 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 TAS2R39P59534 338 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 SLC10A2Q12908 348 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-204ENST00000449510 TMEM132BQ14DG7 1078 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 BTBD8Q5XKL5 378 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 GALNT5Q7Z7M9 940 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 C11orf74Q86VG3 221 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ZDHHC13Q8IUH4 622 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 FAM126BQ8IXS8 530 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 OR8H2Q8N162 312 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 PTGR2Q8N8N7 351 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms