RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 MIA3Q5JRA6 1907 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 A0A0D9SEW6 157 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 LILRB3O75022 631 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 GJB3O75712 270 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 C2P06681 752 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 CHRNA4P43681 627 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 ARCN1P48444 511 aaKnown RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 AQP5P55064 265 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 RIPK1Q13546 671 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 HSF5Q4G112 596 aaPredicted RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 ACBD5Q5T8D3 534 aaPredicted RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 CLEC14AQ86T13 490 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 ZC3HC1Q86WB0 502 aaKnown RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 SUGP1Q8IWZ8 645 aaKnown RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 TCEAL8Q8IYN2 117 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 TNS4Q8IZW8 715 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 IMP4Q96G21 291 aaKnown RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 TRMT2BQ96GJ1 504 aaKnown RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 PRICKLE1Q96MT3 831 aaPredicted RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 RAB3IPQ96QF0 476 aaPredicted RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 SLC22A12Q96S37 553 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 GPR22Q99680 433 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 RHOJQ9H4E5 214 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 MRM3Q9HC36 420 aaKnown RBP16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 TRPC7Q9HCX4 862 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 BAIAP2L1Q9UHR4 511 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 SLC39A10Q9ULF5 831 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 PCDHB12Q9Y5F1 795 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 ACTL7AQ9Y615 435 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 PLXNA4Q9HCM2 1894 aa16.28■□□□□ 0.2
AP000253.1-201ENST00000449339 TSPAN3O60637 253 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 SERPINE1P05121 402 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 CNPP09543 421 aaKnown RBP16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 ARNTP27540 789 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 HADHAP40939 763 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 SLC1A6P48664 564 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 SLC11A2P49281 568 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 IRF9Q00978 393 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 DSC2Q02487 901 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 SERINC3Q13530 473 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 GRM3Q14832 879 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 CNGA3Q16281 694 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 KLHDC10Q6PID8 442 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 KDELC1Q6UW63 502 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 CNTN4Q8IWV2 1026 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 PGBD5Q8N414 524 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 BADQ92934 168 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 UTP4Q969X6 686 aaKnown RBP16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 PRR11Q96HE9 360 aaPredicted RBP16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 ZBP1Q9H171 429 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 VPS45Q9NRW7 570 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 SLC2A6Q9UGQ3 507 aa16.27■□□□□ 0.2
AP000253.1-201ENST00000449339 TRAFD1O14545 582 aaPredicted RBP16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 ITM2AO43736 263 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 LYPLA1O75608 230 aaPredicted RBP16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 AHSGP02765 367 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 CPA3P15088 417 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 GRK2P25098 689 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 CD86P42081 329 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 EPHB3P54753 998 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 CDK18Q07002 472 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 UGP2Q16851 508 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 TTC7BQ86TV6 843 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 ALYREFQ86V81 257 aaKnown RBP16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 KLHL23Q8NBE8 558 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 OR7D4Q8NG98 312 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 NSMCE1Q8WV22 266 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 KLF16Q9BXK1 252 aaPredicted RBP16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 NMUR2Q9GZQ4 415 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 WWP1Q9H0M0 922 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 NOD2Q9HC29 1040 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 TREX1Q9NSU2 369 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 LNPEPQ9UIQ6 1025 aa16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 AGO1Q9UL18 857 aaKnown RBP16.27■□□□□ 0.19
AP000253.1-201ENST00000449339 OBSL1O75147 1896 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 TGM5O43548 720 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 HNRNPCL1O60812 293 aaKnown RBP16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 PAMP19021 973 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 GABRB3P28472 473 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 PPM1AP35813 382 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 MAPKAPK2P49137 400 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 MNAT1P51948 309 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 SEPT6Q14141 434 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 PARP15Q460N3 678 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 C5orf22Q49AR2 442 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 RAPH1Q70E73 1250 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 DENND6AQ8IWF6 608 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 FIBCD1Q8N539 461 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 SLC25A41Q8N5S1 370 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 PIWIL2Q8TC59 973 aaKnown RBP16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 PLD4Q96BZ4 506 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 ZBED2Q9BTP6 218 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 ARNT2Q9HBZ2 717 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 CHD5Q8TDI0 1954 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 ALPK3Q96L96 1907 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 H3BNC9 293 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 FCHO1O14526 889 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 FGBP02675 491 aa16.26■□□□□ 0.19
AP000253.1-201ENST00000449339 MMP2P08253 660 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms