RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CD320Q9NPF0 282 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 GOLGA6AQ9NYA3 693 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 FAM153AQ9UHL3 310 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 SHOC2Q9UQ13 582 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 TCF20Q9UGU0 1960 aaKnown RBP14.23□□□□□ -0.13
SHMT2-203ENST00000449049 UNC80Q8N2C7 3258 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 TCRBV7S3A2A0A539 114 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 SMAPO00193 183 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 PSMD3O43242 534 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 SUN1O94901 812 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 APRTP07741 180 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 SERPINF2P08697 491 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 CAV1Q03135 178 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 FBXO43Q4G163 708 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 WDR93Q6P2C0 686 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 SERPINA13PQ6UXR4 307 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ZNF687Q8N1G0 1237 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 PDCD7Q8N8D1 485 aaKnown RBP14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ZNF513Q8N8E2 541 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-203ENST00000449049 EIF1ADQ8N9N8 165 aaKnown RBP14.23□□□□□ -0.13
SHMT2-203ENST00000449049 OR2A12Q8NGT7 310 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 PTPRN2Q92932 1015 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ACOX2Q99424 681 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ZDHHC18Q9NUE0 388 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 EDDM13A0A1B0GTR0 161 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 KRBA1A5PL33 1030 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 WASH3PC4AMC7 463 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 E7EVH7 732 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 TMEM63AO94886 807 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 PRKCHP24723 683 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 ECHS1P30084 290 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 CARSP49589 748 aaKnown RBP14.22□□□□□ -0.13
SHMT2-203ENST00000449049 CCNHP51946 323 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-203ENST00000449049 SEC13P55735 322 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 STARD6P59095 220 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 CDK16Q00536 496 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 ELF2Q15723 593 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 DPY19L3Q6ZPD9 716 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 LRRC40Q9H9A6 602 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 UBP1Q9NZI7 540 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 EVLQ9UI08 416 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-203ENST00000449049 MUTYHQ9UIF7 546 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 ANAPC5Q9UJX4 755 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 STON1Q9Y6Q2 735 aa14.22□□□□□ -0.13
SHMT2-203ENST00000449049 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-203ENST00000449049 HLA-EP13747 358 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 CD72P21854 359 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 MRPS21P82921 87 aaKnown RBP14.21□□□□□ -0.13
SHMT2-203ENST00000449049 MYLK3Q32MK0 819 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 SYCP2LQ5T4T6 812 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 ZNF366Q8N895 744 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 MCUQ8NE86 351 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 FBXO25Q8TCJ0 367 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 SHDQ96IW2 340 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 MRGPRX2Q96LB1 330 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 TUBGCP5Q96RT8 1024 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 MTG2Q9H4K7 406 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 CACNA2D2Q9NY47 1150 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 FBXL21Q9UKT6 434 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 COL6A3P12111 3177 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 POP4O95707 220 aaKnown RBP14.21□□□□□ -0.13
SHMT2-203ENST00000449049 TUBBP07437 444 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 ADRA1AP35348 466 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 TIE1P35590 1138 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 RECQLP46063 649 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-203ENST00000449049 LMAN1P49257 510 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 PLTPP55058 493 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 WNT3AP56704 352 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 GRM3Q14832 879 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 C9orf64Q5T6V5 341 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 TRMT11Q7Z4G4 463 aaKnown RBP14.21□□□□□ -0.13
SHMT2-203ENST00000449049 CHPFQ8IZ52 775 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 OR6K2Q8NGY2 324 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 IFT81Q8WYA0 676 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 ANKRD7Q92527 254 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 GABRG3Q99928 467 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 PARD6BQ9BYG5 372 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 CPEB1Q9BZB8 566 aaKnown RBP14.21□□□□□ -0.13
SHMT2-203ENST00000449049 NEUROG2Q9H2A3 272 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 ZDHHC4Q9NPG8 344 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 SUN2Q9UH99 717 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 RAB21Q9UL25 225 aa14.21□□□□□ -0.13
SHMT2-203ENST00000449049 PMPCBO75439 489 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 MCM3P25205 808 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 NTSR1P30989 418 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 VSNL1P62760 191 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 RAD51Q06609 339 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 TJAP1Q5JTD0 557 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 ZNF534Q76KX8 674 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 RYBPQ8N488 228 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-203ENST00000449049 IL17RCQ8NAC3 791 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 CHST14Q8NCH0 376 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 IPMKQ8NFU5 416 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 FEM1CQ96JP0 617 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 HEPHQ9BQS7 1158 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 TDRD1Q9BXT4 1180 aaKnown RBP14.2□□□□□ -0.14
SHMT2-203ENST00000449049 NDRG2Q9UN36 371 aaKnown RBP14.2□□□□□ -0.14
SHMT2-203ENST00000449049 MRPS17Q9Y2R5 130 aaKnown RBP14.2□□□□□ -0.14
SHMT2-203ENST00000449049 LOC285095A0A1B0GVY8 99 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 KANSL1LA0AUZ9 987 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms