RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CDH24Q86UP0 819 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 BBS7Q8IWZ6 715 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 TAGAPQ8N103 731 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 OR8K3Q8NH51 312 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 URGCPQ8TCY9 931 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 KLHL6Q8WZ60 621 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 PROX1Q92786 737 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 DNAJC19Q96DA6 116 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 ZSCAN10Q96SZ4 725 aaPredicted RBP10.85□□□□□ -0.67
LINC00342-202ENST00000448494 KCTD14Q9BQ13 255 aaPredicted RBP10.85□□□□□ -0.67
LINC00342-202ENST00000448494 TTYH2Q9BSA4 534 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 ACAD9Q9H845 621 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 MCCC2Q9HCC0 563 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 NECTIN3Q9NQS3 549 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 ASNSD1Q9NWL6 643 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 GPRC5BQ9NZH0 403 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 DPP7Q9UHL4 492 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 MAD2L2Q9UI95 211 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 PACSIN3Q9UKS6 424 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 PCDHA2Q9Y5H9 948 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 SPATA31A1Q5TZJ5 1347 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 A0A1W2PRG6 482 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 M0R3G1 203 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 BTN3A1O00481 513 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 TRIM38O00635 465 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 TOR1BO14657 336 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 AIM2O14862 343 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 ZBTB5O15062 677 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 SLC22A2O15244 555 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 SNAP29O95721 258 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 INHBAP08476 426 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 SSTR1P30872 391 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 TECP42680 631 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 ACOT2P49753 483 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 DEFA1P59665 94 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 DEFA3P59666 94 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 VBP1P61758 197 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 LETM2Q2VYF4 491 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 ZBTB41Q5SVQ8 909 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 HMBOX1Q6NT76 420 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 DPY19L3Q6ZPD9 716 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 CDHR3Q6ZTQ4 885 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 CREB3L2Q70SY1 520 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 PRSS42Q7Z5A4 293 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 RP9Q8TA86 221 aaKnown RBP10.85□□□□□ -0.67
LINC00342-202ENST00000448494 ZNF778Q96MU6 729 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 IARS2Q9NSE4 1012 aaKnown RBP10.85□□□□□ -0.67
LINC00342-202ENST00000448494 TEKT2Q9UIF3 430 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 PTPRFP10586 1907 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 LAMB2P55268 1798 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 LOC102724428A0A0B4J2F2 783 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 HMX3A6NHT5 357 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 FOXN3O00409 490 aaPredicted RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 PLD2O14939 933 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 KPNA5O15131 536 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 TLR3O15455 904 aaKnown RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 ST8SIA5O15466 376 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 PAPSS1O43252 624 aaPredicted RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 DCXO43602 365 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 SYNCRIPO60506 623 aaKnown RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 ZBTB7AO95365 584 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 SEC24AO95486 1093 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 SLC4A1P02730 911 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 RFX1P22670 979 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 CBLP22681 906 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 ERP29P30040 261 aaKnown RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 GJC1P36383 396 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 SOX9P48436 509 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 ARCN1P48444 511 aaKnown RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 SIK1P57059 783 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 PTP4A2Q12974 167 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 NFIL3Q16649 462 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 DCAF17Q5H9S7 520 aaPredicted RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 TTC39BQ5VTQ0 682 aaPredicted RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 DRICH1Q6PGQ1 229 aaPredicted RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 UTS2BQ765I0 119 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 PALM2Q8IXS6 379 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 ATAD1Q8NBU5 361 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 TAS1R2Q8TE23 839 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 XAGE3Q8WTP9 111 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 SLC35C1Q96A29 364 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 VTI1AQ96AJ9 217 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 CNDP1Q96KN2 507 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 DSN1Q9H410 356 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 NOL11Q9H8H0 719 aaKnown RBP10.84□□□□□ -0.67
LINC00342-202ENST00000448494 ADGRE2Q9UHX3 823 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 RNF112Q9ULX5 631 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 NRCAMQ92823 1304 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 SCN4AP35499 1836 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 TCRBV3S1A0A5B6 114 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 GSG1L2A8MUP6 293 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 PLA2G6O60733 806 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 ZNF623O75123 536 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 GABARAPO95166 117 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 PRKCBP05771 671 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 ITGALP20701 1170 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 F8A1P23610 371 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 CAPGP40121 348 aa10.84□□□□□ -0.67
LINC00342-202ENST00000448494 PSMD8P48556 350 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms