RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 WDR45BQ5MNZ6 344 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 TMCO4Q5TGY1 634 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 MARC1Q5VT66 337 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 KIAA0895LQ68EN5 471 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 SLC9A4Q6AI14 798 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 FBXL19Q6PCT2 694 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 PARS2Q7L3T8 475 aaKnown RBP13.54□□□□□ -0.24
SNHG4-201ENST00000448190 TTC7BQ86TV6 843 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 OR2T34Q8NGX1 318 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 EXD1Q8NHP7 514 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 ALG3Q92685 438 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 CALR3Q96L12 384 aaKnown RBP13.54□□□□□ -0.24
SNHG4-201ENST00000448190 ZNF599Q96NL3 588 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 HERPUD2Q9BSE4 406 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 EBF2Q9HAK2 575 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 RBM22Q9NW64 420 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNHG4-201ENST00000448190 PPP2R2CQ9Y2T4 447 aa13.54□□□□□ -0.24
SNHG4-201ENST00000448190 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.54□□□□□ -0.24
SNHG4-201ENST00000448190 EP300Q09472 2414 aaPredicted RBP13.54□□□□□ -0.24
SNHG4-201ENST00000448190 hCG_1818297A0A087WSY0 165 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 KCNK1O00180 336 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 MATN3O15232 486 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 PLRG1O43660 514 aaKnown RBP13.53□□□□□ -0.24
SNHG4-201ENST00000448190 KRT86O43790 486 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 NRDCO43847 1150 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 GDF9O60383 454 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 RNGTTO60942 597 aaKnown RBP13.53□□□□□ -0.24
SNHG4-201ENST00000448190 PRKCGP05129 697 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 ZNF806P0C7X5 589 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 PYGMP11217 842 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 PECAM1P16284 738 aaPredicted RBP13.53□□□□□ -0.24
SNHG4-201ENST00000448190 ZFXP17010 805 aaPredicted RBP13.53□□□□□ -0.24
SNHG4-201ENST00000448190 CCNCP24863 283 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 ITGB7P26010 798 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 CTNNA2P26232 953 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
SNHG4-201ENST00000448190 MMP13P45452 471 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 RWDD2BP57060 319 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 TFDP2Q14188 446 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 CSRP2Q16527 193 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 PLA2G2CQ5R387 149 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 LRRC49Q8IUZ0 686 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 SYCE1Q8N0S2 351 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 ZCCHC9Q8N567 271 aaKnown RBP13.53□□□□□ -0.24
SNHG4-201ENST00000448190 RNF10Q8N5U6 811 aaKnown RBP13.53□□□□□ -0.24
SNHG4-201ENST00000448190 PPP1R16AQ96I34 528 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 PSKH2Q96QS6 385 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 FAM118BQ9BPY3 351 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 HDAC8Q9BY41 377 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 CEP41Q9BYV8 373 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 TSGA10Q9BZW7 698 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 KCNF1Q9H3M0 494 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 SUV39H2Q9H5I1 410 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 C10orf88Q9H8K7 445 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 NOD2Q9HC29 1040 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 VPS45Q9NRW7 570 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 SEPT10Q9P0V9 454 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 GGT7Q9UJ14 662 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 ITM2BQ9Y287 266 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 TTLL3Q9Y4R7 772 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 PCDHGC4Q9Y5F7 938 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 PCDHGA5Q9Y5G8 931 aa13.53□□□□□ -0.24
SNHG4-201ENST00000448190 MUC22E2RYF6 1773 aaPredicted RBP13.53□□□□□ -0.24
SNHG4-201ENST00000448190 A0A1W2PQU0 124 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 GOLGA8CPA6NN73 597 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 A8MX80 341 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 ZNF487B1APH4 448 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 NEMP1O14524 444 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 WNT9AO14904 365 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 KHNYNO15037 678 aaKnown RBP13.52□□□□□ -0.25
SNHG4-201ENST00000448190 DDX3YO15523 660 aaKnown RBP13.52□□□□□ -0.25
SNHG4-201ENST00000448190 NEBLO76041 1014 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 ADRB3P13945 408 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 CCNB1P14635 433 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 MX2P20592 715 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 ABL2P42684 1182 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 CSNK1DP48730 415 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 CSNK1EP49674 416 aaKnown RBP13.52□□□□□ -0.25
SNHG4-201ENST00000448190 RENBPP51606 427 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 NEK3P51956 506 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 NSUN2Q08J23 767 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNHG4-201ENST00000448190 TRIM61Q5EBN2 209 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 TFDP3Q5H9I0 405 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 CCDC181Q5TID7 509 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 LAYNQ6UX15 382 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 ZC3H18Q86VM9 953 aaKnown RBP13.52□□□□□ -0.25
SNHG4-201ENST00000448190 CCDC13Q8IYE1 715 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 PAF1Q8N7H5 531 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 C12orf50Q8NA57 414 aaPredicted RBP13.52□□□□□ -0.25
SNHG4-201ENST00000448190 DNASE2BQ8WZ79 361 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 RBM41Q96IZ5 413 aaKnown RBP13.52□□□□□ -0.25
SNHG4-201ENST00000448190 TSGA13Q96PP4 275 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 MYOCQ99972 504 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 CPEB1Q9BZB8 566 aaKnown RBP13.52□□□□□ -0.25
SNHG4-201ENST00000448190 SCUBE2Q9NQ36 999 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 CA5BQ9Y2D0 317 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 FADS3Q9Y5Q0 445 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 ABCA7Q8IZY2 2146 aa13.52□□□□□ -0.25
SNHG4-201ENST00000448190 RIF1Q5UIP0 2472 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms