RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 CNGB3Q9NQW8 809 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 CCDC167Q9P0B6 97 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 SMIM35A0A1B0GVV1 85 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 CDC42EP1Q00587 391 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 ITKQ08881 620 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 MFSD10Q14728 455 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 UGP2Q16851 508 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 CYP2R1Q6VVX0 501 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 SETD3Q86TU7 594 aaPredicted RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 MFSD6LQ8IWD5 586 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 TXNDC5Q8NBS9 432 aaKnown RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 HASPINQ8TF76 798 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 ATP6V1E2Q96A05 226 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 EME1Q96AY2 570 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 MPP4Q96JB8 637 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 VAT1Q99536 393 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 CCDC28BQ9BUN5 200 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 MRPL1Q9BYD6 325 aaKnown RBP13.05□□□□□ -0.32
SHC1-210ENST00000448116 TRPV6Q9H1D0 765 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 ZBTB26Q9HCK0 441 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 TRPC7Q9HCX4 862 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 VTI1BQ9UEU0 232 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 TLL2Q9Y6L7 1015 aa13.05□□□□□ -0.32
SHC1-210ENST00000448116 F9P00740 461 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 SPATA31D3P0C874 917 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 HADHAP40939 763 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 SLC1A2P43004 574 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 CLCNKBP51801 687 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 RALGDSQ12967 914 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 AGKQ53H12 422 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 SPATA31D4Q6ZUB0 917 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 BNIPLQ7Z465 357 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 GPR142Q7Z601 462 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 RDH11Q8TC12 318 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 EXT2Q93063 718 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 KLHL32Q96NJ5 620 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 KIFC1Q9BW19 673 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 MRPL46Q9H2W6 279 aaKnown RBP13.04□□□□□ -0.32
SHC1-210ENST00000448116 RBM22Q9NW64 420 aaKnown RBP eCLIP13.04□□□□□ -0.32
SHC1-210ENST00000448116 NSMCE4AQ9NXX6 385 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 NCKIPSDQ9NZQ3 722 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 AAR2Q9Y312 384 aaKnown RBP13.04□□□□□ -0.32
SHC1-210ENST00000448116 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 A0A0G2JMZ2 1700 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 LRRC37A2A6NM11 1700 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 ATP6AP2A0A1C7CYW4 349 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 ATP6AP2O75787 350 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 CNSTQ6PJW8 725 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 ZNF354CQ86Y25 554 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 KDM1BQ8NB78 822 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 CEP70Q8NHQ1 597 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 DNAJC1Q96KC8 554 aaKnown RBP13.04□□□□□ -0.32
SHC1-210ENST00000448116 CNDP1Q96KN2 507 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 BRD8Q9H0E9 1235 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 COMMD3-BMI1R4GMX3 469 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 SLCO1B7G3V0H7 640 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 CCL22O00626 93 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 AXLP30530 894 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 PSME3P61289 254 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 COG7P83436 770 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 RBM20Q5T481 1227 aaKnown RBP13.04□□□□□ -0.32
SHC1-210ENST00000448116 NPLOC4Q8TAT6 608 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 PLEKHG4BQ96PX9 1271 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 PAAF1Q9BRP4 392 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 DDX18Q9NVP1 670 aaKnown RBP13.04□□□□□ -0.32
SHC1-210ENST00000448116 ARHGEF38Q9NXL2 777 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 FBXO5Q9UKT4 447 aa13.04□□□□□ -0.32
SHC1-210ENST00000448116 CCL15-CCL14A0A0B4J2E2 113 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 TCAF2A6NFQ2 919 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 MSI1O43347 362 aaKnown RBP13.03□□□□□ -0.32
SHC1-210ENST00000448116 STRNO43815 780 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 RNASEH2AO75792 299 aaKnown RBP13.03□□□□□ -0.32
SHC1-210ENST00000448116 CTSHP09668 335 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 HCAR3P49019 387 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 CDKL1Q00532 357 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 SCAPQ12770 1279 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 MAP7Q14244 749 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 GRM2Q14416 872 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 CCL15Q16663 113 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 PPP1R3AQ16821 1122 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 IL23RQ5VWK5 629 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 IQSEC1Q6DN90 963 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 ZFP1Q6P2D0 407 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 LDB1Q86U70 411 aaPredicted RBP13.03□□□□□ -0.32
SHC1-210ENST00000448116 EPS15L1Q9UBC2 864 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 BTBD19C9JJ37 291 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 SDHDO14521 159 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 AIF1P55008 147 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 NME5P56597 212 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 LAMB3Q13751 1172 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 ZNF789Q5FWF6 425 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 TSTD2Q5T7W7 516 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 RYBPQ8N488 228 aaPredicted RBP13.03□□□□□ -0.32
SHC1-210ENST00000448116 SCAMP5Q8TAC9 235 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 PPWD1Q96BP3 646 aaKnown RBP13.03□□□□□ -0.32
SHC1-210ENST00000448116 HIC2Q96JB3 615 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 GLOD4Q9HC38 313 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 SFMBT1Q9UHJ3 866 aa13.03□□□□□ -0.32
SHC1-210ENST00000448116 RIMS3Q9UJD0 308 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms