RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 ZCWPW1Q9H0M4 648 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PIGVQ9NUD9 493 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 GNPTGQ9UJJ9 305 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 MBLAC1A4D2B0 266 aaPredicted RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 C5orf60A6NFR6 353 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 E9PBE3 544 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 MAP2K7O14733 419 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 KLHL41O60662 606 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 KRT16P08779 473 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 TCN1P20061 433 aaPredicted RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 RPA3P35244 121 aaPredicted RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 OLFML1Q6UWY5 402 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 ZCCHC23Q6ZST2 131 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 KIF2BQ8N4N8 673 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 OR4L1Q8NH43 312 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PIP4K2CQ8TBX8 421 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CASP10Q92851 521 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 C8orf48Q96LL4 319 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 HAPLN2Q9GZV7 340 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CCSER2Q9H7U1 834 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PTPRHQ9HD43 1115 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 GKN1Q9NS71 199 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 THAP1Q9NVV9 213 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 DTLQ9NZJ0 730 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 NR2E1Q9Y466 385 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 RAI2Q9Y5P3 530 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 SOD2P04179 222 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 UGT2B4P06133 528 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 LTA4HP09960 611 aaKnown RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 NUDT17P0C025 328 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 EEF1B2P24534 225 aaKnown RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 SOAT1P35610 550 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PEX5P50542 639 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 NME5P56597 212 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 GRM3Q14832 879 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CRYMQ14894 314 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CRY1Q16526 586 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 INSCQ1MX18 579 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 C1orf220Q5T0J3 134 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 RHBDF2Q6PJF5 856 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 ZNF461Q8TAF7 563 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 ELMO1Q92556 727 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PSMG2Q969U7 264 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 IGSF21Q96ID5 467 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 RIPOR3Q96MK2 946 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 STRA6Q9BX79 667 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 FAM126AQ9BYI3 521 aaPredicted RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 POMKQ9H5K3 350 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 ALG9Q9H6U8 611 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 MTMR11A4FU01 709 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 EVPLLA8MZ36 301 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 PITPNM1O00562 1244 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 STBD1O95210 358 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 KRT6AP02538 564 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 KRT6BP04259 564 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 TARSP26639 723 aaKnown RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 KRT6CP48668 564 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 NUDT2P50583 147 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 ATXN3P54252 364 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 PLIN5Q00G26 463 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 ITIH4Q14624 930 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 INPP5AQ14642 412 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 NR6A1Q15406 480 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 C12orf50Q8NA57 414 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 SPATA22Q8NHS9 363 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 DDX1Q92499 740 aaKnown RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 HHIPL1Q96JK4 782 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 C17orf80Q9BSJ5 609 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 SLC39A8Q9C0K1 460 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 ELAC1Q9H777 363 aaKnown RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 MID1IP1Q9NPA3 183 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 MIOSQ9NXC5 875 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 SCML2Q9UQR0 700 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 BCORQ6W2J9 1755 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 CD3EAPO15446 510 aaKnown RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 GCATO75600 419 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 AP2A1O95782 977 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 NDST3O95803 873 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 ITGA2BP08514 1039 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 MLNP12872 115 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 MAPK1P28482 360 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 MC4RP32245 332 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 LRRC74AQ0VAA2 488 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 FAM151BQ6UXP7 276 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 HOMEZQ8IX15 550 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 NKAPQ8N5F7 415 aaKnown RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 CMASQ8NFW8 434 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 SH3RF2Q8TEC5 729 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 ZNF75CPQ92670 426 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 SLC25A51Q9H1U9 297 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 COPS7BQ9H9Q2 264 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-213ENST00000448038 LRRC4CQ9HCJ2 640 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 TLR9Q9NR96 1032 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 COMMD8Q9NX08 183 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 ARL15Q9NXU5 204 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 EDIL3O43854 480 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 RPN2P04844 631 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 ELFN1P0C7U0 828 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 TCF4P15884 667 aa7.47□□□□□ -1.21
SYNE1-213ENST00000448038 ALOX15P16050 662 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms