RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ZNF234Q14588 700 aa19.77■□□□□ 0.76
SGCE-207ENST00000447873 PCSK7Q16549 785 aa19.77■□□□□ 0.76
SGCE-207ENST00000447873 CARD16Q5EG05 197 aa19.77■□□□□ 0.76
SGCE-207ENST00000447873 TMEM196Q5HYL7 178 aa19.77■□□□□ 0.76
SGCE-207ENST00000447873 Q6ZVU0 165 aa19.77■□□□□ 0.76
SGCE-207ENST00000447873 MCUQ8NE86 351 aa19.77■□□□□ 0.76
SGCE-207ENST00000447873 OR6K2Q8NGY2 324 aa19.77■□□□□ 0.76
SGCE-207ENST00000447873 FRS2Q8WU20 508 aa19.77■□□□□ 0.76
SGCE-207ENST00000447873 THAP10Q9P2Z0 257 aaPredicted RBP19.77■□□□□ 0.76
SGCE-207ENST00000447873 SUN1O94901 812 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 DRD1P21728 446 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 TNNT3P45378 269 aaPredicted RBP19.76■□□□□ 0.75
SGCE-207ENST00000447873 WNT3AP56704 352 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 IHHQ14623 411 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 NAPEPLDQ6IQ20 393 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 NCEH1Q6PIU2 408 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 KDELC1Q6UW63 502 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 SERPINA13PQ6UXR4 307 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 TPRG1Q6ZUI0 275 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 LINC00523Q86TU6 105 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 ZCCHC9Q8N567 271 aaKnown RBP19.76■□□□□ 0.75
SGCE-207ENST00000447873 TADA1Q96BN2 335 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 MRGPRX2Q96LB1 330 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 ASB2Q96Q27 587 aa19.76■□□□□ 0.75
SGCE-207ENST00000447873 FRMD8Q9BZ67 464 aaPredicted RBP19.76■□□□□ 0.75
SGCE-207ENST00000447873 EVLQ9UI08 416 aaPredicted RBP19.76■□□□□ 0.75
SGCE-207ENST00000447873 MUC22E2RYF6 1773 aaPredicted RBP19.76■□□□□ 0.75
SGCE-207ENST00000447873 K7EQS6 105 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 USP12O75317 370 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 EGFP01133 1207 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 BMP1P13497 986 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 SEC13P55735 322 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 RAD51Q06609 339 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 BRD3Q15059 726 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 MLF2Q15773 248 aaPredicted RBP19.75■□□□□ 0.75
SGCE-207ENST00000447873 SLC14A2Q15849 920 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 EGFLAMQ63HQ2 1017 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 FSTL4Q6MZW2 842 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 DPY19L3Q6ZPD9 716 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 ZNF366Q8N895 744 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 ZNF513Q8N8E2 541 aaPredicted RBP19.75■□□□□ 0.75
SGCE-207ENST00000447873 FAM3CQ92520 227 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 EZH1Q92800 747 aaPredicted RBP19.75■□□□□ 0.75
SGCE-207ENST00000447873 SERPINB12Q96P63 405 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 TBL1YQ9BQ87 522 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 FICDQ9BVA6 458 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 FOXP3Q9BZS1 431 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 TSPYL1Q9H0U9 437 aa19.75■□□□□ 0.75
SGCE-207ENST00000447873 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.74■□□□□ 0.75
SGCE-207ENST00000447873 NPC1O15118 1278 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 POP4O95707 220 aaKnown RBP19.74■□□□□ 0.75
SGCE-207ENST00000447873 GRIA1P42261 906 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 CCNHP51946 323 aaPredicted RBP19.74■□□□□ 0.75
SGCE-207ENST00000447873 ARL4CP56559 192 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 OLIG2Q13516 323 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 HIF1AQ16665 826 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 MYLK3Q32MK0 819 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 MAP9Q49MG5 647 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 EMC10Q5UCC4 262 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 KDELC2Q7Z4H8 507 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 CCDC25Q86WR0 208 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 PLPP6Q8IY26 295 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 PDIK1LQ8N165 341 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 OR2A12Q8NGT7 310 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 IFT43Q96FT9 208 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 PWWP2AQ96N64 755 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 TMEM245Q9H330 911 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 XAB2Q9HCS7 855 aaKnown RBP19.74■□□□□ 0.75
SGCE-207ENST00000447873 HCN2Q9UL51 889 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 ATG2BQ96BY7 2078 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 EDDM13A0A1B0GTR0 161 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 CCDC151A5D8V7 595 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 ANTXRLA6NF34 631 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 MAN2B1O00754 1011 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 ERLIN1O75477 346 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 AGTP01019 485 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 HLA-EP13747 358 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 HNRNPLP14866 589 aaKnown RBP eCLIP19.74■□□□□ 0.75
SGCE-207ENST00000447873 CA4P22748 312 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 TIE1P35590 1138 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 IL12RB1P42701 662 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 HNRNPA1L2Q32P51 320 aaKnown RBP19.74■□□□□ 0.75
SGCE-207ENST00000447873 LRRC8BQ6P9F7 803 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 CAND1Q86VP6 1230 aaKnown RBP19.74■□□□□ 0.75
SGCE-207ENST00000447873 CHPFQ8IZ52 775 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 DNAAF3Q8N9W5 541 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 PTPRN2Q92932 1015 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 NSMCE3Q96MG7 304 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 ACOX2Q99424 681 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 APOL2Q9BQE5 337 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 MTG2Q9H4K7 406 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 ATP13A3Q9H7F0 1226 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 ZDHHC4Q9NPG8 344 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 ARGLU1Q9NWB6 273 aaPredicted RBP19.74■□□□□ 0.75
SGCE-207ENST00000447873 CA14Q9ULX7 337 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 PCDHGC4Q9Y5F7 938 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 RAI2Q9Y5P3 530 aa19.74■□□□□ 0.75
SGCE-207ENST00000447873 AVILO75366 819 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 FAM153BP0C7A2 387 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 MLNP12872 115 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms