RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 GALCP54803 685 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 ART3Q13508 389 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 SPIDRQ14159 915 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 FGL2Q14314 439 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 MYBPC2Q14324 1141 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 EMC2Q15006 297 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 POM121L1PQ3SYA9 428 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 GLIPR1L2Q4G1C9 344 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 ZNF542PQ5EBM4 170 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 YOD1Q5VVQ6 348 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 NCEH1Q6PIU2 408 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 CYB5R4Q7L1T6 521 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 FJX1Q86VR8 437 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 AHI1Q8N157 1196 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 CISD2Q8N5K1 135 aaKnown RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 ZNF366Q8N895 744 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 WBP2Q969T9 261 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 SNRNP40Q96DI7 357 aaKnown RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 FUBP3Q96I24 572 aaKnown RBP eCLIP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 SLC45A3Q96JT2 553 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 YIPF4Q9BSR8 244 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 C1QTNF3Q9BXJ4 246 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 TMPRSS5Q9H3S3 457 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 EPB41L1Q9H4G0 881 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 MCCC2Q9HCC0 563 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 SLAMF7Q9NQ25 335 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 CCM2LQ9NUG4 571 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 SEC63Q9UGP8 760 aaKnown RBP5.21□□□□□ -1.58
SDCBP-205ENST00000447267 ST6GALNAC2Q9UJ37 374 aa5.21□□□□□ -1.58
SDCBP-205ENST00000447267 TGP01266 2768 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 DCHS2Q6V1P9 2916 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 A0A0G2JK05 382 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 C9orf118A6NHY6 69 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 INAFM1C9JVW0 142 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 NEDD8-MDP1E9PL57 170 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 SLC27A2O14975 620 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 GPR42O15529 346 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 PLEKHA8P1O95397 391 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 EDN1P05305 212 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 CISD3P0C7P0 127 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 CSH1P0DML2 217 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 CSH2P0DML3 217 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 DNAJA1P31689 397 aaKnown RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 RPL9P32969 192 aaKnown RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 UGT1A3P35503 534 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 PER3P56645 1201 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 ADAM8P78325 824 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 EIF3IQ13347 325 aaKnown RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 TFDP1Q14186 410 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 ICAM4Q14773 271 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 SAFBQ15424 915 aaKnown RBP eCLIP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 ZNF630Q2M218 657 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 ALKAL1Q6UXT8 129 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 DSTYKQ6XUX3 929 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 PARS2Q7L3T8 475 aaKnown RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 HEATR3Q7Z4Q2 680 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 TMEM135Q86UB9 458 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 BBS7Q8IWZ6 715 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 CACNA2D3Q8IZS8 1091 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 SRBD1Q8N5C6 995 aaKnown RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 IGDCC4Q8TDY8 1250 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 GANCQ8TET4 914 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 TCP11Q8WWU5 503 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 SORCS1Q8WY21 1168 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 LCORQ96JN0 433 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 FOXC2Q99958 501 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 STRADBQ9C0K7 418 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 ZCWPW1Q9H0M4 648 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 CHST11Q9NPF2 352 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 XPNPEP1Q9NQW7 623 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 SPHK2Q9NRA0 654 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 GPR27Q9NS67 375 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 TMLHEQ9NVH6 421 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 NLGN3Q9NZ94 848 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 WRAP73Q9P2S5 460 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 THAP10Q9P2Z0 257 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 HSFX1Q9UBD0 423 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 LRWD1Q9UFC0 647 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 KLF2Q9Y5W3 355 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-205ENST00000447267 DENND4CQ5VZ89 1909 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 OBSL1O75147 1896 aa5.2□□□□□ -1.58
SDCBP-205ENST00000447267 RYR3Q15413 4870 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 LOC101059948A0A1B0GTJ6 334 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 EME2A4GXA9 379 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-205ENST00000447267 ZSCAN5CA6NGD5 496 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-205ENST00000447267 C1QTNF3-AMACRE9PGA6 284 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 STMND1H3BQB6 276 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 NTN3O00634 580 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-205ENST00000447267 KCNN4O15554 427 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 GAS7O60861 476 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 PIAS2O75928 621 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 ALPPL2P10696 532 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 COL6A2P12110 1019 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 CCL4P13236 92 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 GLRA2P23416 452 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 SFNP31947 248 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 DEKP35659 375 aaKnown RBP5.19□□□□□ -1.58
SDCBP-205ENST00000447267 JAK3P52333 1124 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 CDH8P55286 799 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 RPS14P62263 151 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms