RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 CPED1A4D0V7 1026 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 TCAF2A6NFQ2 919 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 KCNU1A8MYU2 1149 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 KPNA3O00505 521 aaPredicted RBP8.13□□□□□ -1.11
LINC02549-201ENST00000445346 MCF2LO15068 1137 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 SCAMP1O15126 338 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 ALOX15BO15296 676 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 TRUB2O95900 331 aaKnown RBP8.13□□□□□ -1.11
LINC02549-201ENST00000445346 CALCAP01258 141 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 SLC2A3P11169 496 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 HNRNPA2B1P22626 353 aaKnown RBP8.13□□□□□ -1.11
LINC02549-201ENST00000445346 CES1P23141 567 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 CDC25BP30305 580 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 PLK1P53350 603 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 CLDN2P57739 230 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 HNRNPKP61978 463 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC02549-201ENST00000445346 CDKN3Q16667 212 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 ISXQ2M1V0 245 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 ZNF542PQ5EBM4 170 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 SYPL2Q5VXT5 272 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 NEK5Q6P3R8 708 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 CCDC81Q6ZN84 652 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 KRBA2Q6ZNG9 492 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 Q6ZSR6 202 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 HSCBQ8IWL3 235 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 TMEM145Q8NBT3 493 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 MED8Q96G25 268 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 MED15Q96RN5 788 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC02549-201ENST00000445346 MUC3BQ9H195 1237 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 FAM204AQ9H8W3 233 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 USP29Q9HBJ7 922 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 POPDC2Q9HBU9 364 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 FZD3Q9NPG1 666 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 TPSG1Q9NRR2 321 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 RMND1Q9NWS8 449 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 DNAJC28Q9NX36 388 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 VPS28Q9UK41 221 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 HEMK1Q9Y5R4 338 aaPredicted RBP8.13□□□□□ -1.11
LINC02549-201ENST00000445346 KALRNO60229 2985 aa8.13□□□□□ -1.11
LINC02549-201ENST00000445346 ARID1BQ8NFD5 2236 aaPredicted RBP8.13□□□□□ -1.11
LINC02549-201ENST00000445346 TP53BP1Q12888 1972 aaPredicted RBP8.12□□□□□ -1.11
LINC02549-201ENST00000445346 A6NNZ2 444 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 K7ESM1 405 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 MED7O43513 233 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 ADAM11O75078 769 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 NEBLO76041 1014 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 IGHA1P01876 353 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 CENPBP07199 599 aaPredicted RBP8.12□□□□□ -1.11
LINC02549-201ENST00000445346 KRT5P13647 590 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 CCR1P32246 355 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 CHRNA3P32297 505 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 PRCPP42785 496 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 GPD2P43304 727 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 RECQLP46063 649 aaPredicted RBP8.12□□□□□ -1.11
LINC02549-201ENST00000445346 TAS2R38P59533 333 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 YWHAZP63104 245 aaKnown RBP8.12□□□□□ -1.11
LINC02549-201ENST00000445346 KRT83P78385 493 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 KRT85P78386 507 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 CDK17Q00537 523 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 PKP1Q13835 747 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 ZNF284Q2VY69 593 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 ZSCAN23Q3MJ62 389 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 PRRT3Q5FWE3 981 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 KIAA1614Q5VZ46 1190 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 ANKRD40Q6AI12 368 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 BEND5Q7L4P6 421 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 RRAGAQ7L523 313 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 PTAR1Q7Z6K3 402 aaPredicted RBP8.12□□□□□ -1.11
LINC02549-201ENST00000445346 HORMAD1Q86X24 394 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 DCP2Q8IU60 420 aaKnown RBP8.12□□□□□ -1.11
LINC02549-201ENST00000445346 ARL14Q8N4G2 192 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 SH2D3CQ8N5H7 860 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 UBR7Q8N806 425 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 ATP11CQ8NB49 1132 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 KAT5Q92993 513 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 SLC35C1Q96A29 364 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 FAM131CQ96AQ9 280 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 GRAMD1AQ96CP6 724 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 ATXN7L3BQ96GX2 97 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 SLC46A1Q96NT5 459 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 ZSWIM1Q9BR11 485 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 FEM1AQ9BSK4 669 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 SSBP4Q9BWG4 385 aaPredicted RBP8.12□□□□□ -1.11
LINC02549-201ENST00000445346 THAP9Q9H5L6 903 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 METTL14Q9HCE5 456 aaKnown RBP8.12□□□□□ -1.11
LINC02549-201ENST00000445346 ASCL3Q9NQ33 180 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 DDIT4Q9NX09 232 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 NCKIPSDQ9NZQ3 722 aa8.12□□□□□ -1.11
LINC02549-201ENST00000445346 CYSRT1A8MQ03 144 aa8.11□□□□□ -1.11
LINC02549-201ENST00000445346 K7ENP7 123 aa8.11□□□□□ -1.11
LINC02549-201ENST00000445346 DDX3YO15523 660 aaKnown RBP8.11□□□□□ -1.11
LINC02549-201ENST00000445346 ALX3O95076 343 aa8.11□□□□□ -1.11
LINC02549-201ENST00000445346 ZNF202O95125 648 aa8.11□□□□□ -1.11
LINC02549-201ENST00000445346 PAK4O96013 591 aaPredicted RBP8.11□□□□□ -1.11
LINC02549-201ENST00000445346 PRNPP04156 253 aa8.11□□□□□ -1.11
LINC02549-201ENST00000445346 CTSLP07711 333 aa8.11□□□□□ -1.11
LINC02549-201ENST00000445346 GIMD1P0DJR0 217 aa8.11□□□□□ -1.11
LINC02549-201ENST00000445346 KRT10P13645 584 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms