RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MLLT6P55198 1093 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-204ENST00000444061 TSTD1Q8NFU3 115 aa14.25□□□□□ -0.13
SMARCA4-204ENST00000444061 ARMC5Q96C12 935 aa14.25□□□□□ -0.13
SMARCA4-204ENST00000444061 SDCCAG3Q96C92 435 aa14.25□□□□□ -0.13
SMARCA4-204ENST00000444061 OTUB2Q96DC9 234 aa14.25□□□□□ -0.13
SMARCA4-204ENST00000444061 SERAC1Q96JX3 654 aa14.25□□□□□ -0.13
SMARCA4-204ENST00000444061 FAM111AQ96PZ2 611 aa14.25□□□□□ -0.13
SMARCA4-204ENST00000444061 KATNBL1Q9H079 304 aa14.25□□□□□ -0.13
SMARCA4-204ENST00000444061 GMNCA6NCL1 334 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 SLC25A14O95258 325 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 DPYSL2Q16555 572 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 ITPRIPL2Q3MIP1 535 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 TMEM139Q8IV31 216 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 CCDC3Q9BQI4 270 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 EBF3Q9H4W6 596 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 ZFYVE1Q9HBF4 777 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 PHPT1Q9NRX4 125 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 AKAP7Q9P0M2 348 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 DGKIO75912 1065 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 CATP04040 527 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 HADHBP55084 474 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 TAF11Q15544 211 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 CYP4F12Q9HCS2 524 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 DNAJC16Q9Y2G8 782 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 L3MBTL1Q9Y468 752 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 TMEM189-UBE2V1I3L0A0 370 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 CHN1P15882 459 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 TIE1P35590 1138 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 HSPA14Q0VDF9 509 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 TCEA2Q15560 299 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 CA9Q16790 459 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 LY6G5CQ5SRR4 150 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 PRUNE1Q86TP1 453 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 NIPA2Q8N8Q9 360 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 ST13P5Q8NFI4 369 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 LMO3Q8TAP4 145 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 ELMO1Q92556 727 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 PRCCQ92733 491 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 GRAMD1AQ96CP6 724 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 SERPINI1Q99574 410 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 COPS8Q99627 209 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 ARIH1Q9Y4X5 557 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 DDX3YO15523 660 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 LMNAP02545 664 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 TPBGLP0DKB5 382 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 ERVK-10P10266 1014 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 CRABP2P29373 138 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 IFNA8P32881 189 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 AARSP49588 968 aaKnown RBP eCLIP14.24□□□□□ -0.133e-6■□□□□ 9.5
SMARCA4-204ENST00000444061 ECT2LQ008S8 904 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 DSC2Q02487 901 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 C1orf220Q5T0J3 134 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 SLC39A8Q9C0K1 460 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 SLC25A51Q9H1U9 297 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 MARCOQ9UEW3 520 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 RREB1Q92766 1687 aa14.24□□□□□ -0.13
SMARCA4-204ENST00000444061 ILVBLA1L0T0 632 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 RAD51BO15315 384 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 ZBTB14O43829 449 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 GYS2P54840 703 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 NAB1Q13506 487 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 EFTUD2Q15029 972 aaKnown RBP eCLIP14.23□□□□□ -0.134e-7■■■■□ 22
SMARCA4-204ENST00000444061 SETD3Q86TU7 594 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 PCDH19Q8TAB3 1148 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 HDAC7Q8WUI4 952 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 QKIQ96PU8 341 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 NINJ2Q9NZG7 142 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 DOCK2Q92608 1830 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 DET1Q7L5Y6 550 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 C11orf96Q7Z7L8 435 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 MAGEC3Q8TD91 643 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 HNRNPLLQ8WVV9 542 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 KXD1Q9BQD3 176 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 COPS7BQ9H9Q2 264 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 KCND1Q9NSA2 647 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 PCDHGC4Q9Y5F7 938 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 SPACA6W5XKT8 324 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 C5orf60A6NFR6 353 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 SPECC1L-ADORA2AF8WAN1 911 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 INPP4BO15327 924 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 INSIG1O15503 277 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 COCHO43405 550 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 TYRP14679 529 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 CAPRIN1Q14444 709 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 CHI3L2Q15782 390 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 FAM133BQ5BKY9 247 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 VITQ6UXI7 678 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 SUGP1Q8IWZ8 645 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 NCLNQ969V3 563 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 CXorf40BQ96DE9 158 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 SPATA17Q96L03 361 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 GIMAP4Q9NUV9 329 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 GNPTGQ9UJJ9 305 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 BCLAF3A2AJT9 711 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 TCP11X1B4DZS4 312 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 ATG13O75143 517 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 ATP5HO75947 161 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 GUCA1CO95843 209 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 DGKAP23743 735 aa14.23□□□□□ -0.13
SMARCA4-204ENST00000444061 MAPRE2Q15555 327 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms