RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 NT5MQ9NPB1 228 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 RBM22Q9NW64 420 aaKnown RBP eCLIP12.49□□□□□ -0.412e-8■□□□□ 9.5
USP1-203ENST00000442679 TRMT1Q9NXH9 659 aaKnown RBP12.49□□□□□ -0.41
USP1-203ENST00000442679 NCDNQ9UBB6 729 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 GMEB2Q9UKD1 530 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 WDR87Q6ZQQ6 2873 aa12.49□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3DA0A087WVF3 549 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3IA0A087WXS9 549 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3EA0A087X179 549 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3KA0A087X1G2 549 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TTC24A2A3L6 582 aaPredicted RBP12.48□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3FA6NER0 549 aaPredicted RBP12.48□□□□□ -0.41
USP1-203ENST00000442679 C16orf96A6NNT2 1141 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3LB9A6J9 549 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 GFRA3O60609 400 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 GJB3O75712 270 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 NEBLO76041 1014 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TJP3O95049 919 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 EPN2O95208 641 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 JCHAINP01591 159 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3HP0C7X1 549 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 ADPRHP54922 357 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 CREB5Q02930 508 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 ITKQ08881 620 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 GRM3Q14832 879 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 SYCP2LQ5T4T6 812 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 PIP5KL1Q5T9C9 394 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 AGBL4Q5VU57 503 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 LYSMD4Q5XG99 296 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3GQ6DHY5 549 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3CQ6IPX1 549 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 FBXL19Q6PCT2 694 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 B4GALNT4Q76KP1 1039 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 CAMK1DQ8IU85 385 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 SLC41A1Q8IVJ1 513 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 TBC1D3Q8IZP1 549 aaPredicted RBP12.48□□□□□ -0.41
USP1-203ENST00000442679 OR2T34Q8NGX1 318 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 RUBCNQ92622 972 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 FAM131CQ96AQ9 280 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 HSPA12BQ96MM6 686 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 ZNF641Q96N77 438 aaPredicted RBP12.48□□□□□ -0.41
USP1-203ENST00000442679 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 PCED1AQ9H1Q7 454 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 ARRDC1-AS1Q9H2J1 176 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 SUV39H2Q9H5I1 410 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 ATP13A3Q9H7F0 1226 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 HAUS2Q9NVX0 235 aa12.48□□□□□ -0.41
USP1-203ENST00000442679 ZFHX2Q9C0A1 2572 aaPredicted RBP12.47□□□□□ -0.41
USP1-203ENST00000442679 FRYLO94915 3013 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 NYNRINQ9P2P1 1898 aaKnown RBP12.47□□□□□ -0.41
USP1-203ENST00000442679 BCLAF3A2AJT9 711 aaKnown RBP12.47□□□□□ -0.41
USP1-203ENST00000442679 METTL12A8MUP2 240 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 MEI4A8MW99 385 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 APOC4-APOC2K7ER74 178 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 KCNK1O00180 336 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 PLRG1O43660 514 aaKnown RBP12.47□□□□□ -0.41
USP1-203ENST00000442679 FSBPO95073 299 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 PIGNO95427 931 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 APOC2P02655 101 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 ITPKAP23677 461 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 SERPINA4P29622 427 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 MAPK8P45983 427 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 NEK3P51956 506 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 MAXP61244 160 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 AP1S1P61966 158 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 IFI35P80217 286 aaPredicted RBP12.47□□□□□ -0.41
USP1-203ENST00000442679 BCL2L1Q07817 233 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 WDR45BQ5MNZ6 344 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 DCAF12L1Q5VU92 463 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 PARS2Q7L3T8 475 aaKnown RBP12.47□□□□□ -0.41
USP1-203ENST00000442679 CYP2U1Q7Z449 544 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 TTC7BQ86TV6 843 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 ZC3H18Q86VM9 953 aaKnown RBP12.47□□□□□ -0.41
USP1-203ENST00000442679 RGL4Q8IZJ4 473 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 HCAR2Q8TDS4 363 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 TFB1MQ8WVM0 346 aaKnown RBP12.47□□□□□ -0.41
USP1-203ENST00000442679 PIGKQ92643 395 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 NUDCD1Q96RS6 583 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 MGME1Q9BQP7 344 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 KDM4CQ9H3R0 1056 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 NOD2Q9HC29 1040 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 SEPT10Q9P0V9 454 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 DKK3Q9UBP4 350 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 AMACRQ9UHK6 382 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 PYCARDQ9ULZ3 195 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 TTLL3Q9Y4R7 772 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 PCDHGA5Q9Y5G8 931 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 NUP205Q92621 2012 aa12.47□□□□□ -0.41
USP1-203ENST00000442679 FANCMQ8IYD8 2048 aa12.46□□□□□ -0.41
USP1-203ENST00000442679 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.46□□□□□ -0.41
USP1-203ENST00000442679 GOLGA6L9A6NEM1 432 aa12.46□□□□□ -0.41
USP1-203ENST00000442679 HACD1B0YJ81 288 aa12.46□□□□□ -0.41
USP1-203ENST00000442679 KCNK3O14649 394 aa12.46□□□□□ -0.41
USP1-203ENST00000442679 ADRB3P13945 408 aa12.46□□□□□ -0.41
USP1-203ENST00000442679 TIMP2P16035 220 aa12.46□□□□□ -0.41
USP1-203ENST00000442679 CR2P20023 1033 aa12.46□□□□□ -0.41
USP1-203ENST00000442679 CES1P23141 567 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms