RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ACTN2P35609 894 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 ZNF143P52747 638 aaPredicted RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 AIF1P55008 147 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 INSM1Q01101 510 aaPredicted RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 PTP4A2Q12974 167 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 PDE1CQ14123 709 aaPredicted RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 PTK2BQ14289 1009 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 MYLK3Q32MK0 819 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 PARP15Q460N3 678 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 ZNF542PQ5EBM4 170 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 CFAP58Q5T655 872 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 ATXN7L2Q5T6C5 722 aaPredicted RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 FAM72AQ5TYM5 149 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 FAM72DQ6L9T8 149 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 WDR59Q6PJI9 974 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 GDPD4Q6W3E5 623 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 KDM7AQ6ZMT4 941 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 RBM43Q6ZSC3 357 aaKnown RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 MON1BQ7L1V2 547 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 FAM72BQ86X60 149 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 SLC22A18ASQ8N1D0 253 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 CACTIN-AS1Q8N1I8 211 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 PAF1Q8N7H5 531 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 RTL3Q8N8U3 475 aaKnown RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 BTN2A2Q8WVV5 523 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 RFFLQ8WZ73 363 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 GLMNQ92990 594 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 KLHL32Q96NJ5 620 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 LENG8Q96PV6 779 aaPredicted RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 DEPDC7Q96QD5 511 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 PCDHB18PQ96TA0 734 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 CNPY3Q9BT09 278 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 ABCG4Q9H172 646 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 NBEAQ8NFP9 2946 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 SPTY2D1-AS1A0A0U1RR47 76 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 POM121BA6NF01 834 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 RNF103O00237 685 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 SCAMP1O15126 338 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 MT-CO3P00414 261 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 CSF2P04141 144 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 GP1BAP07359 652 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 NME1P15531 152 aaKnown RBP11.94□□□□□ -0.5
TTC28-203ENST00000442232 HTR7P34969 479 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 ABL2P42684 1182 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 YBEYP58557 167 aaPredicted RBP11.94□□□□□ -0.5
TTC28-203ENST00000442232 TPI1P60174 286 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 ELP6Q0PNE2 266 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 GRM3Q14832 879 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 RTP5Q14D33 572 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 ARTNQ5T4W7 220 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 CCDC183Q5T5S1 534 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 ZCCHC8Q6NZY4 707 aaKnown RBP11.94□□□□□ -0.5
TTC28-203ENST00000442232 TTC7BQ86TV6 843 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 PYROXD2Q8N2H3 581 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 ZNF548Q8NEK5 533 aaPredicted RBP11.94□□□□□ -0.5
TTC28-203ENST00000442232 ASB12Q8WXK4 309 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 APOLD1Q96LR9 279 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 ERGIC2Q96RQ1 377 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 C1QTNF2Q9BXJ5 285 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 TTYH3Q9C0H2 523 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 NEU3Q9UQ49 428 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 ITM2BQ9Y287 266 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 LAMA5O15230 3695 aa11.94□□□□□ -0.5
TTC28-203ENST00000442232 RASA4BC9J798 803 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 TOR1BO14657 336 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 RAD51BO15315 384 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 DAPK3O43293 454 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 AQP9O43315 295 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 RASA4O43374 803 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 OPA1O60313 960 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 BRINP1O60477 761 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 TM7SF2O76062 418 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 CD160O95971 181 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 JUNDP17535 347 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 TNFAIP3P21580 790 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 RPIAP49247 311 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 SUOXP51687 545 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 COL9A2Q14055 689 aaPredicted RBP11.93□□□□□ -0.5
TTC28-203ENST00000442232 FGL2Q14314 439 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 FZD2Q14332 565 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 INO80DQ53TQ3 878 aaPredicted RBP11.93□□□□□ -0.5
TTC28-203ENST00000442232 ACAD10Q6JQN1 1059 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 VPS36Q86VN1 386 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 DNAAF5Q86Y56 855 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 AOPEPQ8N6M6 819 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 DCBLD1Q8N8Z6 715 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 IFI44Q8TCB0 444 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 MAPK15Q8TD08 544 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 LMX1AQ8TE12 382 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 HMCESQ96FZ2 354 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 BMFQ96LC9 184 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 IL12RB2Q99665 862 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 SLC13A1Q9BZW2 595 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 GPR27Q9NS67 375 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 SPASTQ9UBP0 616 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 UBA2Q9UBT2 640 aaPredicted RBP11.93□□□□□ -0.5
TTC28-203ENST00000442232 APOBEC3BQ9UH17 382 aaKnown RBP11.93□□□□□ -0.5
TTC28-203ENST00000442232 GGT7Q9UJ14 662 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 FZD10Q9ULW2 581 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 CSNK1G3Q9Y6M4 447 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms