RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 TRIM24O15164 1050 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 SLC22A2O15244 555 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PEX1O43933 1283 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 AVILO75366 819 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 ATG7O95352 703 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 GUCA1CO95843 209 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 MT-CO1P00395 513 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 GPC1P35052 558 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 SLC1A5Q15758 541 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 PFKFB4Q16877 469 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 LBX2Q6XYB7 198 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 DEFB132Q7Z7B7 95 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 MIEF1Q9NQG6 463 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 USE1Q9NZ43 259 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 KLHL3Q9UH77 587 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 INVSQ9Y283 1065 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 CRYL1Q9Y2S2 319 aa13.01□□□□□ -0.33
BRPF3-203ENST00000441123 TTLL13PA6NNM8 815 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 QSOX1O00391 747 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 MGRN1O60291 552 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ANXA5P08758 320 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 MBTD1Q05BQ5 628 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 DUSP28Q4G0W2 176 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 TEX44Q53QW1 395 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ARMC6Q6NXE6 501 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 STK32CQ86UX6 486 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 PCDH20Q8N6Y1 951 aaKnown RBP13□□□□□ -0.33
BRPF3-203ENST00000441123 ADCY4Q8NFM4 1077 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ATL1Q8WXF7 558 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 GBA3Q9H227 469 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 TMEM245Q9H330 911 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 XPR1Q9UBH6 696 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 FBXO5Q9UKT4 447 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 KLHL20Q9Y2M5 609 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 TCHHQ07283 1943 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ZBTB14O43829 449 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 OCM2P0CE71 109 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 OCMP0CE72 109 aaPredicted RBP13□□□□□ -0.33
BRPF3-203ENST00000441123 SPIRE1Q08AE8 756 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ABRAXAS1Q6UWZ7 409 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ZDHHC24Q6UX98 284 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ARHGAP22Q7Z5H3 698 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 SPATA19Q7Z5L4 167 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ADAMTSL2Q86TH1 951 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 TSPAN14Q8NG11 270 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 TCF12Q99081 682 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 C2orf49Q9BVC5 232 aaPredicted RBP13□□□□□ -0.33
BRPF3-203ENST00000441123 BBS2Q9BXC9 721 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 OSBPL6Q9BZF3 934 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 GLOD4Q9HC38 313 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 SEMA4BQ9NPR2 832 aaPredicted RBP13□□□□□ -0.33
BRPF3-203ENST00000441123 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 IFRD1O00458 451 aaPredicted RBP13□□□□□ -0.33
BRPF3-203ENST00000441123 PAGE2BQ5JRK9 111 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ZNF549Q6P9A3 640 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 C12orf29Q8N999 325 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ZSCAN18Q8TBC5 510 aaPredicted RBP13□□□□□ -0.33
BRPF3-203ENST00000441123 OXCT2Q9BYC2 517 aaPredicted RBP13□□□□□ -0.33
BRPF3-203ENST00000441123 S100A14Q9HCY8 104 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 RPS6KA6Q9UK32 745 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 HS6ST1O60243 411 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 EPN2O95208 641 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 UQCRBP14927 111 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 ADRA1BP35368 520 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 DCTN2Q13561 401 aaKnown RBP13□□□□□ -0.33
BRPF3-203ENST00000441123 CCDC103Q8IW40 242 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 SERAC1Q96JX3 654 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 KRT84Q9NSB2 600 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 COL20A1Q9P218 1284 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 PSMD13Q9UNM6 376 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 SCN11AQ9UI33 1791 aa13□□□□□ -0.33
BRPF3-203ENST00000441123 SF3B1O75533 1304 aaKnown RBP eCLIP12.99□□□□□ -0.334e-7■■■■■ 86.2
BRPF3-203ENST00000441123 AZIN1O14977 448 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 AP2A1O95782 977 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 DARSP14868 501 aaKnown RBP12.99□□□□□ -0.33
BRPF3-203ENST00000441123 PCSK2P16519 638 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 CDC16Q13042 620 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 CRY1Q16526 586 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 WDR60Q8WVS4 1066 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 ZFYVE19Q96K21 471 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 MLPHQ9BV36 600 aaPredicted RBP12.99□□□□□ -0.33
BRPF3-203ENST00000441123 YIPF2Q9BWQ6 316 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 IPPQ9Y573 584 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.99□□□□□ -0.33
BRPF3-203ENST00000441123 OR6C75A6NL08 312 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 MMP3P08254 477 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 CCNCP24863 283 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 RPL3P39023 403 aaKnown RBP12.99□□□□□ -0.33
BRPF3-203ENST00000441123 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
BRPF3-203ENST00000441123 HECTD3Q5T447 861 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 ZYG11AQ6WRX3 759 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 RNF148Q8N7C7 305 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 SLC4A5Q9BY07 1137 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 RHBDL2Q9NX52 303 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 DUSP12Q9UNI6 340 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 PNMA8CA0A1B0GUJ8 204 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 OTCP00480 354 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 GSTT1P30711 240 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 PLK1P53350 603 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 GPRIN3Q6ZVF9 776 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms