RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 HDAC4P56524 1084 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 JAM2P57087 298 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 YBEYP58557 167 aaPredicted RBP13.73□□□□□ -0.21
GARNL3-206ENST00000439286 RHOAP61586 193 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 FGL2Q14314 439 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 TBC1D25Q3MII6 688 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 RAB6CQ53S08 254 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 INO80DQ53TQ3 878 aaPredicted RBP13.73□□□□□ -0.21
GARNL3-206ENST00000439286 CFAP58Q5T655 872 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 CDKAL1Q5VV42 579 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 DCUN1D2Q6PH85 259 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 WDR59Q6PJI9 974 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 PHF13Q86YI8 300 aaPredicted RBP13.73□□□□□ -0.21
GARNL3-206ENST00000439286 C3orf20Q8ND61 904 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 ZNF548Q8NEK5 533 aaPredicted RBP13.73□□□□□ -0.21
GARNL3-206ENST00000439286 TPCN2Q8NHX9 752 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 ZNF578Q96N58 590 aaPredicted RBP13.73□□□□□ -0.21
GARNL3-206ENST00000439286 LGMNQ99538 433 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 EPAS1Q99814 870 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 SLC13A1Q9BZW2 595 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 TTYH3Q9C0H2 523 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 RAB6CQ9H0N0 254 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 SALL4Q9UJQ4 1053 aa13.73□□□□□ -0.21
GARNL3-206ENST00000439286 TOR1BO14657 336 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 TPP1O14773 563 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 USP12O75317 370 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 TMCC1O94876 653 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 MYF5P13349 255 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 SUOXP51687 545 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 ZNF143P52747 638 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-206ENST00000439286 COPB1P53618 953 aaKnown RBP13.72□□□□□ -0.21
GARNL3-206ENST00000439286 GSCP56915 257 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-206ENST00000439286 YPEL5P62699 121 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 CCDC173Q0VFZ6 552 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 NR0B2Q15466 257 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 CDKN3Q16667 212 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 ARTNQ5T4W7 220 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 ATXN7L2Q5T6C5 722 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-206ENST00000439286 FAXCQ5TGI0 409 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 BROXQ5VW32 411 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 VPS36Q86VN1 386 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 RTL3Q8N8U3 475 aaKnown RBP13.72□□□□□ -0.21
GARNL3-206ENST00000439286 ZNF248Q8NDW4 579 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 GBP4Q96PP9 640 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 PCDHB18PQ96TA0 734 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 KLF6Q99612 283 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-206ENST00000439286 AGPAT1Q99943 283 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 APOBEC3BQ9UH17 382 aaKnown RBP13.72□□□□□ -0.21
GARNL3-206ENST00000439286 DOLKQ9UPQ8 538 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 ITM2BQ9Y287 266 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 SPEGQ15772 3267 aa13.72□□□□□ -0.21
GARNL3-206ENST00000439286 COL5A1P20908 1838 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 FAM208BQ5VWN6 2430 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 GOLGA6L22H0YM25 854 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 EPHB6O15197 1021 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 FGF10O15520 208 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 MMP20O60882 483 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 CSO75390 466 aaKnown RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 MPOP05164 745 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 ANXA6P08133 673 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 GIMD1P0DJR0 217 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 ANP32AP39687 249 aaKnown RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 BLKP51451 505 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 PCBP4P57723 403 aaKnown RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 PFN3P60673 137 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 GABREP78334 506 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 MYL5Q02045 173 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 ELP6Q0PNE2 266 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 PTP4A2Q12974 167 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 GRM3Q14832 879 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 DEFB133Q30KQ1 61 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 PARP15Q460N3 678 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 ESRP1Q6NXG1 681 aaKnown RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 PPP1R2P3Q6NXS1 205 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 EFL1Q7Z2Z2 1120 aaKnown RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 PAF1Q8N7H5 531 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 SCG3Q8WXD2 468 aaKnown RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 GRAMD1AQ96CP6 724 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 CRELD1Q96HD1 420 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 FCRL3Q96P31 734 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-206ENST00000439286 MAGEB5Q9BZ81 275 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 GPR27Q9NS67 375 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 LMBRD1Q9NUN5 540 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 SIK3Q9Y2K2 1263 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 PCDHB1Q9Y5F3 818 aa13.71□□□□□ -0.21
GARNL3-206ENST00000439286 ZZEF1O43149 2961 aa13.71□□□□□ -0.22
GARNL3-206ENST00000439286 TMEM110-MUSTN1A8MSY1 372 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 LGALS16A8MUM7 142 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 RASA4BC9J798 803 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 DAPK3O43293 454 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 CCP110O43303 1012 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 RASA4O43374 803 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 TNFAIP3P21580 790 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 HTR1BP28222 390 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 RBMS1P29558 406 aaKnown RBP13.7□□□□□ -0.22
GARNL3-206ENST00000439286 HTR7P34969 479 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 LSSP48449 732 aa13.7□□□□□ -0.22
GARNL3-206ENST00000439286 ADKP55263 362 aaKnown RBP13.7□□□□□ -0.22
GARNL3-206ENST00000439286 PPARDQ03181 441 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms