RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 KDM1BQ8NB78 822 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 NSUN6Q8TEA1 469 aaKnown RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 ACDQ96AP0 544 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 PCYT2Q99447 389 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 SLX1AQ9BQ83 275 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 POMKQ9H5K3 350 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 SIAEQ9HAT2 523 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 WARS2Q9UGM6 360 aaKnown RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 ZNHIT2Q9UHR6 403 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 TRPC5Q9UL62 973 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 PADI4Q9UM07 663 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 GINS2Q9Y248 185 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 KRBA1A5PL33 1030 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 NR5A2O00482 541 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 AURKAO14965 403 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 AXIN1O15169 862 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 MERTKQ12866 999 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 SPIDRQ14159 915 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 PLA2G4EQ3MJ16 856 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 STXBP5Q5T5C0 1151 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 TXNDC5Q8NBS9 432 aaKnown RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 GPRASP2Q96D09 838 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 MRPL45Q9BRJ2 306 aaKnown RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 GBA2Q9HCG7 927 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 GPRC5DQ9NZD1 345 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 SNX10Q9Y5X0 201 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 ZCWPW2A0A1B0GU75 182 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 ZBBXA8MT70 800 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 AGRPO00253 132 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 BMP10O95393 424 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 PIGRP01833 764 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 MAGP20916 626 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 BAG6P46379 1132 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 IREB2P48200 963 aaKnown RBP13.52□□□□□ -0.24
ACTN1-204ENST00000438964 PRKAA1Q13131 559 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 DPYSQ14117 519 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 SURF1Q15526 300 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 INSCQ1MX18 579 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 VPS26BQ4G0F5 336 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 TSTD2Q5T7W7 516 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 DHRS4L2Q6PKH6 230 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 DSG4Q86SJ6 1040 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 CENPLQ8N0S6 344 aaPredicted RBP13.52□□□□□ -0.24
ACTN1-204ENST00000438964 AKT1S1Q96B36 256 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 ZNF670Q9BS34 389 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 VPS33BQ9H267 617 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 ADNPQ9H2P0 1102 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 ZNF385DQ9H6B1 395 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 SPAG4Q9NPE6 437 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 EXD2Q9NVH0 621 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 MORF4L1Q9UBU8 362 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 DSEQ9UL01 958 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 SQORQ9Y6N5 450 aa13.52□□□□□ -0.24
ACTN1-204ENST00000438964 SHROOM3Q8TF72 1996 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 NRXN2Q9P2S2 1712 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 KDM1AO60341 852 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 IL18RAPO95256 599 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 EGFRP00533 1210 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 PLIN5Q00G26 463 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 CSHL1Q14406 222 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 POU6F1Q14863 301 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 LY6KQ17RY6 165 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 RGS21Q2M5E4 152 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 RETREG3Q86VR2 466 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 MFSD6LQ8IWD5 586 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 CMTR2Q8IYT2 770 aaKnown RBP13.52□□□□□ -0.25
ACTN1-204ENST00000438964 SHCBP1Q8NEM2 672 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 TSNARE1Q96NA8 513 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 KLHL25Q9H0H3 589 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 CDT1Q9H211 546 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 SPATA7Q9P0W8 599 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 POU2F3Q9UKI9 436 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 FADS3Q9Y5Q0 445 aa13.52□□□□□ -0.25
ACTN1-204ENST00000438964 ZFC3H1O60293 1989 aaKnown RBP13.52□□□□□ -0.25
ACTN1-204ENST00000438964 TMEM114B3SHH9 223 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 INPP4BO15327 924 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 TPD52L2O43399 206 aaKnown RBP13.51□□□□□ -0.25
ACTN1-204ENST00000438964 SLC35E2BP0CK96 405 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 PCNAP12004 261 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 BDNFP23560 247 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 SLC7A1P30825 629 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 IDUAP35475 653 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 CDH13P55290 713 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 SLC6A3Q01959 620 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 NFATC3Q12968 1075 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 KIF19Q2TAC6 998 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 DCLRE1AQ6PJP8 1040 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 PBXIP1Q96AQ6 731 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 UNC93B1Q9H1C4 597 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 VPS45Q9NRW7 570 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 NME7Q9Y5B8 376 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 FAM72CH0Y354 149 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 PPP6CO00743 305 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 UBDO15205 165 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-204ENST00000438964 PGK1P00558 417 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 C8BP07358 591 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 STAT5BP51692 787 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 BCAT1P54687 386 aa13.51□□□□□ -0.25
ACTN1-204ENST00000438964 HMGCS2P54868 508 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms