RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TTC39BQ5VTQ0 682 aaPredicted RBP11.37□□□□□ -0.59
CSTF3-203ENST00000438862 PHACTR4Q8IZ21 702 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 RBFAQ8N0V3 343 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 FSTL5Q8N475 847 aaPredicted RBP11.37□□□□□ -0.59
CSTF3-203ENST00000438862 IL22RA1Q8N6P7 574 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 ASB12Q8WXK4 309 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 ALG14Q96F25 216 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 ABHD17AQ96GS6 310 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 KLF6Q99612 283 aaPredicted RBP11.37□□□□□ -0.59
CSTF3-203ENST00000438862 FEM1AQ9BSK4 669 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 LRRC61Q9BV99 259 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 CLPBQ9H078 707 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 RMND1Q9NWS8 449 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 AKAP7Q9P0M2 348 aaPredicted RBP11.37□□□□□ -0.59
CSTF3-203ENST00000438862 NAALADL1Q9UQQ1 740 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 CELSR2Q9HCU4 2923 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 TCAF2A6NFQ2 919 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 F5H5T6 163 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 PDXKO00764 312 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 RAD51BO15315 384 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 SIAH2O43255 324 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 DDAH2O95865 285 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 MOCS2O96007 188 aaPredicted RBP11.36□□□□□ -0.59
CSTF3-203ENST00000438862 APOEP02649 317 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 KRT7P08729 469 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 ALPIP09923 528 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 GCLMP48507 274 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 BLKP51451 505 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 YPEL5P62699 121 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 ENPEPQ07075 957 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 ELOCQ15369 112 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 RABGAP1LQ5R372 815 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 TPRG1LQ5T0D9 272 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 RAP1GAP2Q684P5 730 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 CAPRIN2Q6IMN6 1127 aaKnown RBP11.36□□□□□ -0.59
CSTF3-203ENST00000438862 HEATR4Q86WZ0 1026 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 CHSY1Q86X52 802 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 GALNT11Q8NCW6 608 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 DENND6BQ8NEG7 585 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 OR2A12Q8NGT7 310 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 UBA3Q8TBC4 463 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 BTN2A3PQ96KV6 586 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 C1QTNF2Q9BXJ5 285 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 TCEAL2Q9H3H9 227 aaPredicted RBP11.36□□□□□ -0.59
CSTF3-203ENST00000438862 APPL1Q9UKG1 709 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 HS3ST2Q9Y278 367 aa11.36□□□□□ -0.59
CSTF3-203ENST00000438862 PRR19A6NJB7 356 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 TOR1BO14657 336 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 AP1G1O43747 822 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 FBXO21O94952 628 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 RHOBTB3O94955 611 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 NR3C1P04150 777 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 VDRP11473 427 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 SRCP12931 536 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 LIFP15018 202 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 PNLIPP16233 465 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 PPP1R2P41236 205 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 NUMBP49757 651 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 NEK3P51956 506 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 MLLT10P55197 1068 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 KRT83P78385 493 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 PPARDQ03181 441 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 CUL4BQ13620 913 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 SEPT6Q14141 434 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 CT47A1Q5JQC4 288 aaPredicted RBP11.35□□□□□ -0.59
CSTF3-203ENST00000438862 CEP135Q66GS9 1140 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 CXorf57Q6NSI4 855 aaKnown RBP11.35□□□□□ -0.59
CSTF3-203ENST00000438862 CAVIN1Q6NZI2 390 aaKnown RBP11.35□□□□□ -0.59
CSTF3-203ENST00000438862 INTS8Q75QN2 995 aaKnown RBP11.35□□□□□ -0.59
CSTF3-203ENST00000438862 CCNJLQ8IV13 435 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 TEX19Q8NA77 164 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 DQX1Q8TE96 717 aaKnown RBP11.35□□□□□ -0.59
CSTF3-203ENST00000438862 SLC35F5Q8WV83 523 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 APOBEC4Q8WW27 367 aaKnown RBP11.35□□□□□ -0.59
CSTF3-203ENST00000438862 JPH3Q8WXH2 748 aaPredicted RBP11.35□□□□□ -0.59
CSTF3-203ENST00000438862 SMARCE1Q969G3 411 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 TAAR9Q96RI9 348 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 TMEM8AQ9HCN3 771 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 TMEM63CQ9P1W3 806 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 SLC12A6Q9UHW9 1150 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 VPS28Q9UK41 221 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 FADS3Q9Y5Q0 445 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 RNF215Q9Y6U7 377 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 SDK2Q58EX2 2172 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 MED13Q9UHV7 2174 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 CRYBG3Q68DQ2 2970 aa11.35□□□□□ -0.59
CSTF3-203ENST00000438862 KCNU1A8MYU2 1149 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 TSPAN6O43657 245 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 KLRC4O43908 158 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 CNTN5O94779 1100 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 ADRB3P13945 408 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 CTSEP14091 401 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 GLB1P16278 677 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 DCTP40126 519 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 PPP3CAQ08209 521 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 COBLL1Q53SF7 1204 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 KRT39Q6A163 491 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 BEND5Q7L4P6 421 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 GKN2Q86XP6 184 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms