RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 H0YIN7 160 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 PYCARD-AS1I3L0S3 204 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ANGPT2O15123 496 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CETN3O15182 167 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CYTIPO60759 359 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 DIAPH2O60879 1101 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZC3H11AO75152 810 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 PPP6R2O75170 966 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 TOX4O94842 621 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRPF6O94906 941 aaKnown RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRAMEF12O95522 483 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 DIRAS3O95661 229 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 NTSR2O95665 410 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 DDAH2O95865 285 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 AHSGP02765 367 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CYP21A2P08686 494 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 LTA4HP09960 611 aaKnown RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZNF853P0CG23 659 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 TXNP10599 105 aaKnown RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 PCNAP12004 261 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 NCF1P14598 390 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 MALP21145 153 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 SFPQP23246 707 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ALDH1B1P30837 517 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 SDHAP31040 664 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCR1P32246 355 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 EPS15P42566 896 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCR10P46092 362 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 NRIP1P48552 1158 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 NR2C2P49116 596 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 LMAN1P49257 510 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ALDH18A1P54886 795 aaKnown RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 SOX8P57073 446 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CDC42EP1Q00587 391 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 PMP22Q01453 160 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRKCEQ02156 737 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 RNASELQ05823 741 aaKnown RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 GPS1Q13098 491 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 GPM6BQ13491 265 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 EFTUD2Q15029 972 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 RPS6KA1Q15418 735 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 DPYSL2Q16555 572 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 AAK1Q2M2I8 961 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 SLC5A9Q2M3M2 681 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 TRIM60Q495X7 471 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CRY2Q49AN0 593 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ANKRD20A4Q4UJ75 823 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ANKRD20A8PQ5CZ79 823 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 TCTE1Q5JU00 501 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ANKRD20A2Q5SQ80 823 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ANKRD20A1Q5TYW2 823 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ANKRD20A3Q5VUR7 823 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 NCEH1Q6PIU2 408 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 USP17L6PQ6QN14 398 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 MTHFD1LQ6UB35 978 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 MSANTD1Q6ZTZ1 278 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZNF365Q70YC5 407 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCDC80Q76M96 950 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CHST9Q7L1S5 443 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CAND1Q86VP6 1230 aaKnown RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCDC28AQ8IWP9 274 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 RHOT1Q8IXI2 618 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 LCORLQ8N3X6 602 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 BANPQ8N9N5 519 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 IL17RCQ8NAC3 791 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 GLB1L3Q8NCI6 653 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 MDGA1Q8NFP4 955 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 OR52M1Q8NGK5 317 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZNF671Q8TAW3 534 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 MDM1Q8TC05 714 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 IFI44Q8TCB0 444 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 URGCPQ8TCY9 931 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 GANCQ8TET4 914 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ST8SIA2Q92186 375 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZKSCAN4Q969J2 545 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 SGF29Q96ES7 293 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZDHHC12Q96GR4 267 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRICKLE1Q96MT3 831 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CMTM3Q96MX0 182 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 FIZ1Q96SL8 496 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 DDX50Q9BQ39 737 aaKnown RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 HTATIP2Q9BUP3 242 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZNF518BQ9C0D4 1074 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 SYNPO2LQ9H987 977 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 GDAP2Q9NXN4 497 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 TMOD2Q9NZR1 351 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 TBC1D7Q9P0N9 293 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 ANKFY1Q9P2R3 1169 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 SLC25A10Q9UBX3 287 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 RGS17Q9UGC6 210 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 LIMA1Q9UHB6 759 aaKnown RBP3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 RCOR1Q9UKL0 485 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 SARDHQ9UL12 918 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 PSME2Q9UL46 239 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CLEC4AQ9UMR7 237 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CHKBQ9Y259 395 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 BTBD3Q9Y2F9 522 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 KCNK7Q9Y2U2 307 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 MED16Q9Y2X0 877 aa3.74□□□□□ -1.81
HMGB1P12-201ENST00000438594 CAPN7Q9Y6W3 813 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms