RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CTHP32929 405 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 ADRA1AP35348 466 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 GRIA1P42261 906 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 MAPK8P45983 427 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 WNT3AP56704 352 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 ST8SIA6P61647 398 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 AP1S1P61966 158 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 PFKPQ01813 784 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 DHX9Q08211 1270 aaKnown RBP23.29■■□□□ 1.32
CPSF4-204ENST00000436336 IHHQ14623 411 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 FNBP1LQ5T0N5 605 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 NCEH1Q6PIU2 408 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 TMC3Q7Z5M5 1100 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 SRLQ86TD4 932 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 RALGPS2Q86X27 583 aaPredicted RBP23.29■■□□□ 1.32
CPSF4-204ENST00000436336 RNF135Q8IUD6 432 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 OR2AP1Q8NGE2 309 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 GDAP1L1Q96MZ0 367 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 P2RY13Q9BPV8 354 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 TBL1YQ9BQ87 522 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 PRUNE2Q8WUY3 3088 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 MAGEA3P43357 314 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 GALK1P51570 392 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 TDGQ13569 410 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 PCSK7Q16549 785 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 ATXN7L2Q5T6C5 722 aaPredicted RBP23.28■■□□□ 1.32
CPSF4-204ENST00000436336 RELL1Q8IUW5 271 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 TXLNGYQ9BZA5 131 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 TNKS2Q9H2K2 1166 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 CASS4Q9NQ75 786 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 PRKAG3Q9UGI9 489 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 USP12O75317 370 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 PDIA2Q13087 525 aaKnown RBP23.28■■□□□ 1.32
CPSF4-204ENST00000436336 OLIG2Q13516 323 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 ADHFE1Q8IWW8 467 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 PLPP6Q8IY26 295 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 OR52K1Q8NGK4 314 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 FICDQ9BVA6 458 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 SLC2A4RGQ9NR83 387 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 PIAS3Q9Y6X2 628 aa23.28■■□□□ 1.32
CPSF4-204ENST00000436336 MYLKQ15746 1914 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 SRFP11831 508 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 CDH17Q12864 832 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 CARD16Q5EG05 197 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 RANBP10Q6VN20 620 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 FRS2Q8WU20 508 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 NSMCE3Q96MG7 304 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 SAYSD1Q9NPB0 183 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 HEBP1Q9NRV9 189 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 THEGQ9P2T0 379 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 STARD13Q9Y3M8 1113 aa23.27■■□□□ 1.32
CPSF4-204ENST00000436336 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.26■■□□□ 1.31
CPSF4-204ENST00000436336 LOC285095A0A1B0GVY8 99 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 NARSO43776 548 aaKnown RBP23.26■■□□□ 1.31
CPSF4-204ENST00000436336 AVILO75366 819 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 AGTP01019 485 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 EPOP01588 193 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 GLULP15104 373 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 TNNT3P45378 269 aaPredicted RBP23.26■■□□□ 1.31
CPSF4-204ENST00000436336 BBS9Q3SYG4 887 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 MSS51Q4VC12 460 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 DNAJC21Q5F1R6 531 aaKnown RBP23.26■■□□□ 1.31
CPSF4-204ENST00000436336 SFTPA1Q8IWL2 248 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 MREGQ8N565 214 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 DNAAF3Q8N9W5 541 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 IFT43Q96FT9 208 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 MSANTD3Q96H12 275 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 FEM1CQ96JP0 617 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 APOL2Q9BQE5 337 aa23.26■■□□□ 1.31
CPSF4-204ENST00000436336 FBRSL1Q9HCM7 1045 aaKnown RBP23.26■■□□□ 1.31
CPSF4-204ENST00000436336 EVLQ9UI08 416 aaPredicted RBP23.26■■□□□ 1.31
CPSF4-204ENST00000436336 ARIH1Q9Y4X5 557 aaPredicted RBP23.26■■□□□ 1.31
CPSF4-204ENST00000436336 TTC34A8MYJ7 566 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 ALOX15BO15296 676 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 CA4P22748 312 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 TNFRSF4P43489 277 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 PMS2P54278 862 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 CDK18Q07002 472 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 E2F5Q15329 346 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 RYBPQ8N488 228 aaPredicted RBP23.25■■□□□ 1.31
CPSF4-204ENST00000436336 LRRC39Q96DD0 335 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 TDRD1Q9BXT4 1180 aaKnown RBP23.25■■□□□ 1.31
CPSF4-204ENST00000436336 ARNT2Q9HBZ2 717 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 TCF20Q9UGU0 1960 aaKnown RBP23.25■■□□□ 1.31
CPSF4-204ENST00000436336 MAGEA4P43358 317 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 RECQLP46063 649 aaPredicted RBP23.25■■□□□ 1.31
CPSF4-204ENST00000436336 MTM1Q13496 603 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 ZNF234Q14588 700 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 FNDC3BQ53EP0 1204 aaKnown RBP23.25■■□□□ 1.31
CPSF4-204ENST00000436336 TXNDC11Q6PKC3 985 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 Q6ZVU0 165 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 ZBED8Q8IZ13 594 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 THAP10Q9P2Z0 257 aaPredicted RBP23.25■■□□□ 1.31
CPSF4-204ENST00000436336 RAI2Q9Y5P3 530 aa23.25■■□□□ 1.31
CPSF4-204ENST00000436336 HLA-DPA1P20036 260 aa23.24■■□□□ 1.31
CPSF4-204ENST00000436336 NPY2RP49146 381 aa23.24■■□□□ 1.31
CPSF4-204ENST00000436336 CCNHP51946 323 aaPredicted RBP23.24■■□□□ 1.31
CPSF4-204ENST00000436336 ZP2Q05996 745 aa23.24■■□□□ 1.31
CPSF4-204ENST00000436336 RAD51Q06609 339 aa23.24■■□□□ 1.31
CPSF4-204ENST00000436336 GRM3Q14832 879 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms