RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 CDKN3Q16667 212 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CCDC14Q49A88 953 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FAM72AQ5TYM5 149 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FAM72DQ6L9T8 149 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 STRADAQ7RTN6 431 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FAM72BQ86X60 149 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ZNF677Q86XU0 584 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DRC7Q8IY82 874 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 OR6K2Q8NGY2 324 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MAPK15Q8TD08 544 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CPA5Q8WXQ8 436 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 NTAN1Q96AB6 310 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 WBP1Q96G27 269 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 LRRC61Q9BV99 259 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 OSBPL1AQ9BXW6 950 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 STK33Q9BYT3 514 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 OSBPL2Q9H1P3 480 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MAGEH1Q9H213 219 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GANQ9H2C0 597 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 NOL6Q9H6R4 1146 aaKnown RBP11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 THSD1Q9NS62 852 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 OR12D3Q9UGF7 316 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ENTPD2Q9Y5L3 495 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CFAP46Q8IYW2 2715 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FAM170AA1A519 330 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 LMO7DNF2Z398 122 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RAMP2O60895 175 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GCATO75600 419 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TCEA3O75764 348 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CHRNB2P17787 502 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DNA2P51530 1060 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 JAM2P57087 298 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SNRPD1P62314 119 aaKnown RBP11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ATP11AP98196 1134 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CDR2Q01850 454 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RHDQ02161 417 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PTP4A2Q12974 167 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 NR0B2Q15466 257 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 C15orf59Q2T9L4 293 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DEFB133Q30KQ1 61 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 C6orf132Q5T0Z8 1188 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MACC1Q6ZN28 852 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 EFL1Q7Z2Z2 1120 aaKnown RBP11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SLC35F3Q8IY50 421 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RBFAQ8N0V3 343 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CCDC185Q8N715 623 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TP53I13Q8NBR0 393 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TPCN2Q8NHX9 752 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GPT2Q8TD30 523 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SLC20A1Q8WUM9 679 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 KCNE4Q8WWG9 221 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TTC9Q92623 222 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ARHGEF26Q96DR7 871 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 VCPIP1Q96JH7 1222 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SLC46A1Q96NT5 459 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TCEAL2Q9H3H9 227 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CLSTN2Q9H4D0 955 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 APOBEC3BQ9UH17 382 aaKnown RBP11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SATB2Q9UPW6 733 aa11.11□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ASH1LQ9NR48 2969 aaKnown RBP11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DOCK4Q8N1I0 1966 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TSPAN11A1L157 253 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PMS2P1A4D2B8 440 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 NTN3O00634 580 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TMCC1O94876 653 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 UGT2B4P06133 528 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 UNGP13051 313 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SDC4P31431 198 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MLLT3P42568 568 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 YPEL5P62699 121 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SGCGQ13326 291 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 POLD3Q15054 466 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CDO1Q16878 200 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TPD52L1Q16890 204 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MYLK3Q32MK0 819 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ARL13BQ3SXY8 428 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TCP11X2Q5H9J9 407 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PERM1Q5SV97 790 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RBM44Q6ZP01 1051 aaKnown RBP11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CLEC14AQ86T13 490 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PHACTR4Q8IZ21 702 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 JOSD2Q8TAC2 188 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 LMX1AQ8TE12 382 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 BTN2A2Q8WVV5 523 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RXFP2Q8WXD0 754 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 NAT6Q93015 286 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TBC1D31Q96DN5 1066 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ATXN7L3BQ96GX2 97 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 NAF1Q96HR8 494 aaKnown RBP11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MAGEB5Q9BZ81 275 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DPH1Q9BZG8 443 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CLPBQ9H078 707 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CPNE5Q9HCH3 593 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SPASTQ9UBP0 616 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DKK3Q9UBP4 350 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DNAI1Q9UI46 699 aa11.1□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MFHAS1Q9Y4C4 1052 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms