RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GJC1P36383 396 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 TROAPQ12815 778 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 DCAF6Q58WW2 860 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 GGT6Q6P531 493 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 FOXL2NBQ6ZUU3 175 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 KLHDC8BQ8IXV7 354 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 FAM186BQ8IYM0 893 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 IL17RCQ8NAC3 791 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 ZNF527Q8NB42 609 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 SETD9Q8NE22 299 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 STT3BQ8TCJ2 826 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 TBC1D22AQ8WUA7 517 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 C3orf49Q96BT1 292 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 TNIP3Q96KP6 325 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 EPYCQ99645 322 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 ATP8A2Q9NTI2 1148 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 HDAC6Q9UBN7 1215 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 DHDHQ9UQ10 334 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 GAB2Q9UQC2 676 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 LDLRP01130 860 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 GM2AP17900 193 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 PTPN9P43378 593 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 CENPAP49450 140 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 VEGFCP49767 419 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 ZNF132P52740 706 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 SLC18A2Q05940 514 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 DMP1Q13316 513 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-205ENST00000433888 BYSLQ13895 437 aaKnown RBP3.84□□□□□ -1.79
PTPN4-205ENST00000433888 KLHL17Q6TDP4 642 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 KLHL24Q6TFL4 600 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 NEK10Q6ZWH5 1172 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 RRAGAQ7L523 313 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 GALNT15Q8N3T1 639 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 ZNF441Q8N8Z8 693 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 SECTM1Q8WVN6 248 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 LRFN5Q96NI6 719 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 PLEKHA2Q9HB19 425 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 SMARCAL1Q9NZC9 954 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 MMP24Q9Y5R2 645 aa3.84□□□□□ -1.79
PTPN4-205ENST00000433888 A0A087WV62 115 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 STRNO43815 780 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 GAGE7O76087 117 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 CBX6O95503 412 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 METTL18O95568 372 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 CSF1P09603 554 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 GAGE12FP0CL80 117 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 GAGE12GP0CL81 117 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 GAGE12IP0CL82 117 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 CTPS1P17812 591 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 TTKP33981 857 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 PNPLA4P41247 253 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 ARHGAP8P85298 464 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 GAGE1Q13065 139 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 GAGE4Q13068 117 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 PDCLQ13371 301 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 PICALMQ13492 652 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 THOC5Q13769 683 aaKnown RBP3.83□□□□□ -1.8
PTPN4-205ENST00000433888 CAPSQ13938 189 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 IL13RA2Q14627 380 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 CALCRLQ16602 461 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 ME3Q16798 604 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 PLEKHO1Q53GL0 409 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-205ENST00000433888 CCDC117Q8IWD4 279 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-205ENST00000433888 MB21D2Q8IYB1 491 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-205ENST00000433888 CIARTQ8N365 385 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-205ENST00000433888 FSIP1Q8NA03 581 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 ZMIZ2Q8NF64 920 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 RASSF8Q8NHQ8 419 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 TRAPPC9Q96Q05 1148 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 OR6C3Q9NZP0 311 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 PCDHAC2Q9Y5I4 1007 aa3.83□□□□□ -1.8
PTPN4-205ENST00000433888 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 HNRNPCL2B2RXH8 293 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 P2RY10O00398 339 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 KDM4BO94953 1096 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 CLDN14O95500 239 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 ZBTB17Q13105 803 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 SMAD1Q15797 465 aaKnown RBP3.82□□□□□ -1.8
PTPN4-205ENST00000433888 AP5B1Q2VPB7 878 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 TANGO2Q6ICL3 276 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 GDPD4Q6W3E5 623 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 SYNE3Q6ZMZ3 975 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 MON1AQ86VX9 555 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 MAB21L3Q8N8X9 362 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 NCSTNQ92542 709 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 ARNT2Q9HBZ2 717 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 ARFGAP3Q9NP61 516 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 NLRC4Q9NPP4 1024 aa3.82□□□□□ -1.8
PTPN4-205ENST00000433888 TLR8Q9NR97 1041 aaKnown RBP3.82□□□□□ -1.8
PTPN4-205ENST00000433888 FAM172BPA6NC97 362 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 H0Y3Z8 333 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 IL1AP01583 271 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 CRYAAP02489 173 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 LINC00271P0C7V0 271 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 TAF6P49848 677 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 ECT2LQ008S8 904 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 FBXO43Q4G163 708 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 XRRA1Q6P2D8 792 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 PGBD2Q6P3X8 592 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms