RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 KCNF1Q9H3M0 494 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 ATP13A3Q9H7F0 1226 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 SCUBE2Q9NQ36 999 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 TRMT1Q9NXH9 659 aaKnown RBP15.73■□□□□ 0.11
TREX1-201ENST00000433541 SAE1Q9UBE0 346 aaPredicted RBP15.73■□□□□ 0.11
TREX1-201ENST00000433541 PI4KAP42356 2102 aa15.73■□□□□ 0.11
TREX1-201ENST00000433541 ZFHX2Q9C0A1 2572 aaPredicted RBP15.73■□□□□ 0.11
TREX1-201ENST00000433541 GOLGA6L9A6NEM1 432 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 MATN3O15232 486 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 INSIG1O15503 277 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 TJP3O95049 919 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 PCDH8O95206 1070 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 RETP07949 1114 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 CCNB1P14635 433 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 ITGB7P26010 798 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 SERPINA4P29622 427 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 MAPK8P45983 427 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 NR2C2P49116 596 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 ADPRHP54922 357 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 MAXP61244 160 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 BCL2L1Q07817 233 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 RPS6KA1Q15418 735 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 ZNF805Q5CZA5 627 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 WDR45BQ5MNZ6 344 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 DCAF12L1Q5VU92 463 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 NCEH1Q6PIU2 408 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 ZNF662Q6ZS27 426 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 B4GALNT4Q76KP1 1039 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 ZC3H18Q86VM9 953 aaKnown RBP15.72■□□□□ 0.11
TREX1-201ENST00000433541 PDCD6IPQ8WUM4 868 aaKnown RBP15.72■□□□□ 0.11
TREX1-201ENST00000433541 LOXL4Q96JB6 756 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 PSKH2Q96QS6 385 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 FERMT1Q9BQL6 677 aa15.72■□□□□ 0.11
TREX1-201ENST00000433541 C6orf106Q9H6K1 298 aaPredicted RBP15.72■□□□□ 0.11
TREX1-201ENST00000433541 RBM22Q9NW64 420 aaKnown RBP eCLIP15.72■□□□□ 0.11
TREX1-201ENST00000433541 DOCK9Q9BZ29 2069 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 TTC24A2A3L6 582 aaPredicted RBP15.71■□□□□ 0.11
TREX1-201ENST00000433541 H7C0C1 242 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 KCNK1O00180 336 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 SLC7A4O43246 635 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 EPN2O95208 641 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 CFIP05156 583 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 PYGMP11217 842 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 PECAM1P16284 738 aaPredicted RBP15.71■□□□□ 0.11
TREX1-201ENST00000433541 ITPKAP23677 461 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 MPLP40238 635 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 RGRP47804 291 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 ATP5OP48047 213 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 PEX5P50542 639 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 SPEM2Q0P670 501 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 HNRNPDQ14103 355 aaKnown RBP15.71■□□□□ 0.11
TREX1-201ENST00000433541 SPDYCQ5MJ68 293 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 AADACL2Q6P093 401 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 BBS12Q6ZW61 710 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 PARS2Q7L3T8 475 aaKnown RBP15.71■□□□□ 0.11
TREX1-201ENST00000433541 ALYREFQ86V81 257 aaKnown RBP15.71■□□□□ 0.11
TREX1-201ENST00000433541 DCLK2Q8N568 766 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 CADM4Q8NFZ8 388 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 OR2T34Q8NGX1 318 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 TFB1MQ8WVM0 346 aaKnown RBP15.71■□□□□ 0.11
TREX1-201ENST00000433541 HES6Q96HZ4 224 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 TUBGCP5Q96RT8 1024 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 POLR1EQ9GZS1 481 aaKnown RBP15.71■□□□□ 0.11
TREX1-201ENST00000433541 TRPM6Q9BX84 2022 aa15.71■□□□□ 0.11
TREX1-201ENST00000433541 PLXNA2O75051 1894 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 C16orf96A6NNT2 1141 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 APOC4-APOC2K7ER74 178 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 MUSKO15146 869 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 DDX3YO15523 660 aaKnown RBP15.7■□□□□ 0.1
TREX1-201ENST00000433541 PLRG1O43660 514 aaKnown RBP15.7■□□□□ 0.1
TREX1-201ENST00000433541 JCHAINP01591 159 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 APOC2P02655 101 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 ADRB3P13945 408 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 GNSP15586 552 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 MSNP26038 577 aaKnown RBP15.7■□□□□ 0.1
TREX1-201ENST00000433541 MAOBP27338 520 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 DPP6P42658 865 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 AP1S1P61966 158 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 PPIDQ08752 370 aaKnown RBP15.7■□□□□ 0.1
TREX1-201ENST00000433541 NSUN2Q08J23 767 aaKnown RBP eCLIP15.7■□□□□ 0.1
TREX1-201ENST00000433541 TAZQ16635 292 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 LRRC73Q5JTD7 316 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 AGBL4Q5VU57 503 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 KIAA0895LQ68EN5 471 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 TTC7BQ86TV6 843 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 SLC41A1Q8IVJ1 513 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 C12orf50Q8NA57 414 aaPredicted RBP15.7■□□□□ 0.1
TREX1-201ENST00000433541 TSGA13Q96PP4 275 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 HDAC8Q9BY41 377 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 CEP41Q9BYV8 373 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 CPEB1Q9BZB8 566 aaKnown RBP15.7■□□□□ 0.1
TREX1-201ENST00000433541 BRD8Q9H0E9 1235 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 PCED1AQ9H1Q7 454 aa15.7■□□□□ 0.1
TREX1-201ENST00000433541 EIF2B4Q9UI10 523 aaKnown RBP15.7■□□□□ 0.1
TREX1-201ENST00000433541 ADAMTS9Q9P2N4 1935 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 WDR87Q6ZQQ6 2873 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.69■□□□□ 0.1
TREX1-201ENST00000433541 BCLAF3A2AJT9 711 aaKnown RBP15.69■□□□□ 0.1
TREX1-201ENST00000433541 METTL12A8MUP2 240 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 RNF103O00237 685 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms