RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 SGCGQ13326 291 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 COL9A2Q14055 689 aaPredicted RBP22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 PDE1CQ14123 709 aaPredicted RBP22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 PARGQ86W56 976 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 AOPEPQ8N6M6 819 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 ZNF548Q8NEK5 533 aaPredicted RBP22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 FAM174AQ8TBP5 190 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 BAP1Q92560 729 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 RAB7BQ96AH8 199 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 IFT43Q96FT9 208 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 HMCESQ96FZ2 354 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 APOLD1Q96LR9 279 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 GDAP1L1Q96MZ0 367 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 NLGN3Q9NZ94 848 aa22.13■■□□□ 1.13
RPUSD3-206ENST00000433535 ATRXP46100 2492 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 SPTY2D1-AS1A0A0U1RR47 76 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 ANKRD62A6NC57 917 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 FPGTO14772 594 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 TLX3O43711 291 aaPredicted RBP22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 POP4O95707 220 aaKnown RBP22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 ALPPL2P10696 532 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 RABIFP47224 123 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 OGDHQ02218 1023 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 PPP1R15BQ5SWA1 713 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 DCP2Q8IU60 420 aaKnown RBP22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 EPAS1Q99814 870 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 OSBPL1AQ9BXW6 950 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 NRSN2Q9GZP1 204 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 TAS2R14Q9NYV8 317 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 KLF15Q9UIH9 416 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 FZD10Q9ULW2 581 aa22.12■■□□□ 1.13
RPUSD3-206ENST00000433535 LY6G6EA0A0G2JKS1 128 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 ZSCAN5CA6NGD5 496 aaPredicted RBP22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 LRRC10BA6NIK2 292 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 RASA4BC9J798 803 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 K7ESM1 405 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 RASA4O43374 803 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 IGSF6O95976 241 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 CKMT1AP12532 417 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 NME1P15531 152 aaKnown RBP22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 RHOAP61586 193 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 HNRNPKP61978 463 aaKnown RBP eCLIP22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 RTP5Q14D33 572 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 GDPD4Q6W3E5 623 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 ZSCAN30Q86W11 494 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 MCOLN2Q8IZK6 566 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 DCBLD1Q8N8Z6 715 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 EXOC2Q96KP1 924 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 LENG8Q96PV6 779 aaPredicted RBP22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 CNPY3Q9BT09 278 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 TTYH3Q9C0H2 523 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 GPATCH2LQ9NWQ4 482 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 IPO11Q9UI26 975 aaKnown RBP22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 U3KQA8 63 aa22.11■■□□□ 1.13
RPUSD3-206ENST00000433535 H3BM21 787 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 AREL1O15033 823 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 SCAMP1O15126 338 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 ATMINO43313 823 aaPredicted RBP22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 MT-CO3P00414 261 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 CSF2P04141 144 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 FERP16591 822 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 ITIH2P19823 946 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 IGFALSP35858 605 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 E2F1Q01094 437 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 ACAD10Q6JQN1 1059 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 DCUN1D2Q6PH85 259 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 VPS36Q86VN1 386 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 DENND6BQ8NEG7 585 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 ARHGEF26Q96DR7 871 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 TMEM63CQ9P1W3 806 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 PCDHB1Q9Y5F3 818 aa22.1■■□□□ 1.13
RPUSD3-206ENST00000433535 NBEAQ8NFP9 2946 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 NEMP2A6NFY4 417 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 INSIG1O15503 277 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 BRINP1O60477 761 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 MMP20O60882 483 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 ITPKBP27987 946 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 ABCG1P45844 678 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 YBEYP58557 167 aaPredicted RBP22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 PFN3P60673 137 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 EIF2B5Q13144 721 aaKnown RBP22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 SERINC3Q13530 473 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 PARP15Q460N3 678 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 SOWAHCQ53LP3 525 aaPredicted RBP22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 CCDC183Q5T5S1 534 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 TTC7BQ86TV6 843 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 RBFAQ8N0V3 343 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 SYT11Q9BT88 431 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 WRAP53Q9BUR4 548 aaKnown RBP22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 CATSPERBQ9H7T0 1116 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 LHX3Q9UBR4 397 aa22.09■■□□□ 1.13
RPUSD3-206ENST00000433535 TMCO5BA8MYB1 307 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 TEX33O43247 280 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 OPA1O60313 960 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 PIGNO95427 931 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 JUNDP17535 347 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 AIF1P55008 147 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 TPI1P60174 286 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 TYRO3Q06418 890 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 RAD51Q06609 339 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms