RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 NR1H3Q13133 447 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 RALGPS1Q5JS13 557 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 LRIG3Q6UXM1 1119 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 ETFBKMTQ8IXQ9 262 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 CPA6Q8N4T0 437 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.47■□□□□ 0.55
HMGN1-206ENST00000431390 FBXO36Q8NEA4 188 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 IPMKQ8NFU5 416 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 WFIKKN2Q8TEU8 576 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 FGF14Q92915 247 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 MRGPRX2Q96LB1 330 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 SIGLEC10Q96LC7 697 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 ZIM3Q96PE6 472 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 NUDCD1Q96RS6 583 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 TBL1YQ9BQ87 522 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 WDR83Q9BRX9 315 aaKnown RBP18.47■□□□□ 0.55
HMGN1-206ENST00000431390 PLA2G2FQ9BZM2 168 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 IRF2BPLQ9H1B7 796 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 PLAAQ9Y263 795 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 SLC27A6Q9Y2P4 619 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 COL4A3Q01955 1670 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 KIAA1549LQ6ZVL6 1849 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 BANF1O75531 89 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 SERPINF2P08697 491 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 CISD3P0C7P0 127 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 ELK3P41970 407 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 DGKGP49619 791 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 EIF3BP55884 814 aaKnown RBP18.46■□□□□ 0.55
HMGN1-206ENST00000431390 WNT3AP56704 352 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 CDH17Q12864 832 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 SLC29A2Q14542 456 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 ANKMY2Q8IV38 441 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 AGGF1Q8N302 714 aaeCLIP18.46■□□□□ 0.55
HMGN1-206ENST00000431390 NAT16Q8N8M0 369 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 ATP11CQ8NB49 1132 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 OR52K1Q8NGK4 314 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 TTC17Q96AE7 1141 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 KXD1Q9BQD3 176 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 FSD1LQ9BXM9 530 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 LHX3Q9UBR4 397 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 SLC25A13Q9UJS0 675 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 HS3ST2Q9Y278 367 aa18.46■□□□□ 0.55
HMGN1-206ENST00000431390 SDR42E2A6NKP2 422 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 C2CD4DB7Z1M9 353 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 INSIG1O15503 277 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 USP12O75317 370 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 PMPCBO75439 489 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 ACSL3O95573 720 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 MT-CO1P00395 513 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 NPY2RP49146 381 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 RHOAP61586 193 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 RUNX3Q13761 415 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 GAB4Q2WGN9 574 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 RANBP10Q6VN20 620 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 ADIPOR2Q86V24 386 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 CCNJLQ8IV13 435 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 DNAAF3Q8N9W5 541 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 RUFY1Q96T51 708 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 EBNA1BP2Q99848 306 aaKnown RBP18.45■□□□□ 0.54
HMGN1-206ENST00000431390 FICDQ9BVA6 458 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 LRRC4CQ9HCJ2 640 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 BFARQ9NZS9 450 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 SORCS3Q9UPU3 1222 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 CHMP2BQ9UQN3 213 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 NFS1Q9Y697 457 aa18.45■□□□□ 0.54
HMGN1-206ENST00000431390 ANHXE9PGG2 379 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 GALR2O43603 387 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 TULP3O75386 442 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 SPAG6O75602 509 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 CPP00450 1065 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 POLR2EP19388 210 aaKnown RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 RGRP47804 291 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 SESN2P58004 480 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 MTM1Q13496 603 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 GRM2Q14416 872 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 HP1BP3Q5SSJ5 553 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 UBAP2Q5T6F2 1119 aaKnown RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 MBLAC2Q68D91 279 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 MTERF4Q7Z6M4 381 aaKnown RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 C12orf40Q86WS4 652 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 PALM2Q8IXS6 379 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 ST13P5Q8NFI4 369 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 ISG20Q96AZ6 181 aaKnown RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 NAT9Q9BTE0 207 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 TRMT61BQ9BVS5 477 aaKnown RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 ARNT2Q9HBZ2 717 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 SCUBE2Q9NQ36 999 aa18.44■□□□□ 0.54
HMGN1-206ENST00000431390 FCF1Q9Y324 198 aaKnown RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.44■□□□□ 0.54
HMGN1-206ENST00000431390 ANKRD36A6QL64 1941 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 OTOL1A6NHN0 477 aaPredicted RBP18.43■□□□□ 0.54
HMGN1-206ENST00000431390 AGTP01019 485 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 EPOP01588 193 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 GSTA2P09210 222 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 SRCP12931 536 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 MGAT1P26572 445 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 PHBP35232 272 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 CSNK1DP48730 415 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 VASPP50552 380 aaPredicted RBP18.43■□□□□ 0.54
HMGN1-206ENST00000431390 SCNN1BP51168 640 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms