RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 MPP7Q5T2T1 576 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 STEAP3Q658P3 488 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PAOXQ6QHF9 649 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 OTOAQ7RTW8 1153 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SMIM15Q7Z3B0 74 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 FOXRED2Q8IWF2 684 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 DSELQ8IZU8 1212 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 BBS10Q8TAM1 723 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 NAT14Q8WUY8 206 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ADAMTS14Q8WXS8 1223 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 BTBD6Q96KE9 485 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ZFP42Q96MM3 310 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KCNS3Q9BQ31 491 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 WDR77Q9BQA1 342 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KLC2Q9H0B6 622 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 UNKLQ9H9P5 680 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TIGARQ9NQ88 270 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 STOML1Q9UBI4 398 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF70Q9UC06 446 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SLC12A6Q9UHW9 1150 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CHIC2Q9UKJ5 165 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SORCS3Q9UPU3 1222 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 NAALADL1Q9UQQ1 740 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SLC9A8Q9Y2E8 581 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 LCHNA4D1U4 455 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TMEM191CA6NGB0 347 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 DBX1A6NMT0 343 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 OR2AT4A6NND4 320 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 WASHC1A8K0Z3 465 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PHF20L1A8MW92 1017 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 WASH3PC4AMC7 463 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 F8VP50 259 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 GPR182O15218 404 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ASNA1O43681 348 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 RECQL4O94761 1208 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 STSP08842 583 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 DLDP09622 509 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SPATA31D3P0C874 917 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CKMT2P17540 419 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MSR1P21757 451 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CTSSP25774 331 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MAGEA4P43358 317 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MERTKQ12866 999 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 HIKESHIQ53FT3 197 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 IFI44LQ53G44 452 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MTX3Q5HYI7 312 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PRAMEF13Q5VWM6 474 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 WASH2PQ6VEQ5 465 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SPATA31D4Q6ZUB0 917 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TRILQ7L0X0 811 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KLBQ86Z14 1044 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 NXPE1Q8N323 547 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KLHL36Q8N4N3 616 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 RP9Q8TA86 221 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SPPL3Q8TCT6 385 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KBTBD7Q8WVZ9 684 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ZCCHC14Q8WYQ9 949 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 FIG4Q92562 907 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MARC2Q969Z3 335 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MBOAT7Q96N66 472 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TMEM74Q96NL1 305 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KCNK17Q96T54 332 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 OSMRQ99650 979 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 VPS25Q9BRG1 176 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CCM2Q9BSQ5 444 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 OSBPL7Q9BZF2 842 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SEPSECSQ9HD40 501 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MORF4L1Q9UBU8 362 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KLHL3Q9UH77 587 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 RWDD2AQ9UIY3 292 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ABT1Q9ULW3 272 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 IFT52Q9Y366 437 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 LRPPRCP42704 1394 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PBRM1Q86U86 1689 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MIA2Q96PC5 1412 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SHROOM2Q13796 1616 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TEX13CA0A0J9YWL9 993 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 FAM221AA4D161 298 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CFAP73A6NFT4 308 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SLC9A3R1O14745 358 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 MYO1DO94832 1006 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 GCNT3O95395 438 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 AHSA1O95433 338 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 LY86O95711 162 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 UGT2B4P06133 528 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ASNSP08243 561 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 HOXB1P14653 301 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 GRK4P32298 578 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RASSF2P50749 326 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SLAQ13239 276 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 GALEQ14376 348 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RUNDC3AQ59EK9 446 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CARD16Q5EG05 197 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 FKBP9P1Q75LS8 142 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 DCXRQ7Z4W1 244 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PARP8Q8N3A8 854 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CLP1Q92989 425 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 C18orf8Q96DM3 657 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 XAGE2Q96GT9 111 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms