RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 HDAC10Q969S8 669 aa10.24□□□□□ -0.77
RPE-206ENST00000429921 IMP4Q96G21 291 aaKnown RBP10.24□□□□□ -0.77
RPE-206ENST00000429921 PRICKLE1Q96MT3 831 aaPredicted RBP10.24□□□□□ -0.77
RPE-206ENST00000429921 SMG9Q9H0W8 520 aaKnown RBP10.24□□□□□ -0.77
RPE-206ENST00000429921 COPG2Q9UBF2 871 aa10.24□□□□□ -0.77
RPE-206ENST00000429921 DNMT3LQ9UJW3 386 aa10.24□□□□□ -0.77
RPE-206ENST00000429921 FIS1Q9Y3D6 152 aa10.24□□□□□ -0.77
RPE-206ENST00000429921 XIRP2A4UGR9 3374 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 DOCK6Q96HP0 2047 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 FAM92AA1XBS5 289 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ERI2A8K979 691 aaKnown RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 ACSL4O60488 711 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 SNAP91O60641 907 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 CHRNGP07510 517 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 GSTA1P08263 222 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 RALBP11234 206 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 COL6A1P12109 1028 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 PAX3P23760 479 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 SERPINB8P50452 374 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 RENBPP51606 427 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 MNAT1P51948 309 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 KDSRQ06136 332 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 SERINC3Q13530 473 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 LRRC26Q2I0M4 334 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 CTC1Q2NKJ3 1217 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 FSCBQ5H9T9 825 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 CYS1Q717R9 158 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ASRGL1Q7L266 308 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 MAVSQ7Z434 540 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ARL14EPQ8N8R7 260 aaPredicted RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 OR13C4Q8NGS5 318 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 SHKBP1Q8TBC3 707 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ARRDC2Q8TBH0 407 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 MRPL9Q9BYD2 267 aaKnown RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 SLC25A51Q9H1U9 297 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ZNF334Q9HCZ1 680 aaPredicted RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 MTRRQ9UBK8 725 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 DCDC2Q9UHG0 476 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 HBS1LQ9Y450 684 aaKnown RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 GOLGA8QA0A0J9YX86 632 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 FAM95CA0A1B0GW59 222 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 GOLGA8OA6NCC3 632 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 MEI4A8MW99 385 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 GOLGA8NF8WBI6 632 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 G3V2L1 256 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ATP6V1G2O95670 118 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 IGLV3-27P01718 113 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 CNTFP26441 200 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 SERPINH1P50454 418 aaKnown RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 ZNF135P52742 658 aaPredicted RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 NDST2P52849 883 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 PLK1P53350 603 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 TAS2R39P59534 338 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 CYP4F8P98187 520 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ZNF235Q14590 738 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ANO4Q32M45 955 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 HECTD3Q5T447 861 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 STXBP5Q5T5C0 1151 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 SNX30Q5VWJ9 437 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 PIM3Q86V86 326 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 POU5F2Q8N7G0 328 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ZNF781Q8N8C0 355 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 ST13P5Q8NFI4 369 aaPredicted RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 OR6K2Q8NGY2 324 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 APBB2Q92870 758 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 TMEM169Q96HH4 297 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 SPATA17Q96L03 361 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 TBATAQ96M53 351 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 SORT1Q99523 831 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 TBC1D10AQ9BXI6 508 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 UBE2OQ9C0C9 1292 aaKnown RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 CYP4F12Q9HCS2 524 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 TSR3Q9UJK0 312 aaKnown RBP10.23□□□□□ -0.77
RPE-206ENST00000429921 TLK1Q9UKI8 766 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 YIPF1Q9Y548 306 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 PCDHGC4Q9Y5F7 938 aa10.23□□□□□ -0.77
RPE-206ENST00000429921 IGLV3-10A0A075B6K4 115 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 MAGEB16A2A368 324 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 TRIM43BA6NCK2 446 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 DRGXA6NNA5 263 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 NEMP1O14524 444 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 SNNO75324 88 aaPredicted RBP10.22□□□□□ -0.77
RPE-206ENST00000429921 ZMPSTE24O75844 475 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 STC2O76061 302 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 CXCL10P02778 98 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 ZDHHC11BP0C7U3 371 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 SLC35E2BP0CK96 405 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 TSPAN8P19075 237 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 HARS2P49590 506 aaKnown RBP10.22□□□□□ -0.77
RPE-206ENST00000429921 SEMG2Q02383 582 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 HNRNPDQ14103 355 aaKnown RBP10.22□□□□□ -0.77
RPE-206ENST00000429921 ARHGEF6Q15052 776 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 PDPK2PQ6A1A2 396 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 SLC8B1Q6J4K2 584 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 KYAT3Q6YP21 454 aaKnown RBP10.22□□□□□ -0.77
RPE-206ENST00000429921 HS6ST3Q8IZP7 471 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 CARNMT1Q8N4J0 409 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 NSMCE1Q8WV22 266 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 SKA1Q96BD8 255 aa10.22□□□□□ -0.77
RPE-206ENST00000429921 TRIM43Q96BQ3 446 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms