RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 SCNM1Q9BWG6 230 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 GLIS2Q9BZE0 524 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 MOV10Q9HCE1 1003 aaKnown RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 MLXIPLQ9NP71 852 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 BEX4Q9NWD9 120 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 ELOVL5Q9NYP7 299 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 HSPB7Q9UBY9 170 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF112Q9UJU3 913 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 DPPA5A6NC42 116 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 UBE2CO00762 179 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 TSPAN4O14817 238 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 INSIG1O15503 277 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 DKC1O60832 514 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 NTN1O95631 604 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 TUBBP07437 444 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 ALDOCP09972 364 aaKnown RBP3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 EDN2P20800 178 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 HNF1BP35680 557 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 PTPN9P43378 593 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 SHC2P98077 582 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 TMEM115Q12893 351 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 CDC16Q13042 620 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 CHAF1BQ13112 559 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 RABEP1Q15276 862 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 RASA2Q15283 850 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 AP5B1Q2VPB7 878 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 TTI2Q6NXR4 508 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 CYP20A1Q6UW02 462 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 CLEC17AQ6ZS10 378 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 LINC00346Q8IVM7 164 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 SCN4BQ8IWT1 228 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 ADGRF3Q8IZF5 1079 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 C17orf53Q8N3J3 647 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 PAQR4Q8N4S7 273 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 ARFGAP1Q8N6T3 406 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 ENDOVQ8N8Q3 282 aaKnown RBP3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 SLC44A5Q8NCS7 719 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 ETNPPLQ8TBG4 499 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 CALML4Q96GE6 196 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 RSPH9Q9H1X1 276 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 VPS33BQ9H267 617 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 SLC32A1Q9H598 525 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 EPHX3Q9H6B9 360 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 SYNCQ9H7C4 482 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 POLR1BQ9H9Y6 1135 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 VEZTQ9HBM0 779 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 PDE7BQ9NP56 450 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 DIAPH3Q9NSV4 1193 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 TMEM184CQ9NVA4 438 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 KCND2Q9NZV8 630 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 KLQ9UEF7 1012 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 SLCO3A1Q9UIG8 710 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 AGO2Q9UKV8 859 aaKnown RBP3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 MKLN1Q9UL63 735 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 ADAM18Q9Y3Q7 739 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 HS3ST3B1Q9Y662 390 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 CAPN7Q9Y6W3 813 aa3.15□□□□□ -1.91
HMGB1P9-201ENST00000429856 FNDC1Q4ZHG4 1894 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 A0A1W2PQ09 198 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 A0A1W2PQF6 199 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 LIPT2A6NK58 231 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 BTBD18B2RXH4 712 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 MCIDASD6RGH6 385 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 H7C0S8 307 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 TLX3O43711 291 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 UGDHO60701 494 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 ENTPD3O75355 529 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 SEC31AO94979 1220 aaKnown RBP3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 HSPA4LO95757 839 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 LCKP06239 509 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 SPARCP09486 303 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 NR2F1P10589 423 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 VDRP11473 427 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 NFKBIAP25963 317 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 ABCD1P33897 745 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 BSGP35613 385 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 UBA7P41226 1012 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 NR4A2P43354 598 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 MTNR1AP48039 350 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 ME1P48163 572 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 TBL3Q12788 808 aaKnown RBP3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 MYBPC2Q14324 1141 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 RUNDC3AQ59EK9 446 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 C10orf76Q5T2E6 689 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 KLHL24Q6TFL4 600 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 CYB5R4Q7L1T6 521 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 RTL10Q7L3V2 364 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 VPS52Q8N1B4 723 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 FRMD1Q8N878 549 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 ARL14EPQ8N8R7 260 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 ZBTB8BQ8NAP8 495 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 KCTD6Q8NC69 237 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 Q8NFD4 153 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 ZCCHC10Q8TBK6 192 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 WIPF2Q8TF74 440 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 RAB40AQ8WXH6 277 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 ATP2A3Q93084 1043 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 KLHL15Q96M94 604 aa3.14□□□□□ -1.91
HMGB1P9-201ENST00000429856 ZNF347Q96SE7 839 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms