RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 CCNYL1Q8N7R7 359 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 CDC26Q8NHZ8 85 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 HDAC2Q92769 488 aaKnown RBP8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 NKD2Q969F2 451 aaPredicted RBP8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 ASB9Q96DX5 294 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 DYNLL2Q96FJ2 89 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 FAM105AQ9NUU6 356 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 FAM8A1Q9UBU6 413 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 FBXO40Q9UH90 709 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 RAD54BQ9Y620 910 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 STON1Q9Y6Q2 735 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 RGSL1A5PLK6 1076 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 E7ESA3 106 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 INHBAP08476 426 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 CYP2A7P20853 494 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 GLDCP23378 1020 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 CDH5P33151 784 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF76P36508 570 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 GRIA1P42261 906 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 QARSP47897 775 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 MAPK10P53779 464 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 PLA2G16P53816 162 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 GRAPQ13588 217 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 CBX2Q14781 532 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 HABP4Q5JVS0 413 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 GARNL3Q5VVW2 1013 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC16A12Q6ZSM3 486 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 STXBP4Q6ZWJ1 553 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 PCGF5Q86SE9 256 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 NOXA1Q86UR1 476 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 LIX1LQ8IVB5 337 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 EID3Q8N140 333 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 ARL6IP6Q8N6S5 226 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 FLCNQ8NFG4 579 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 OR2T3Q8NH03 318 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 RP9Q8TA86 221 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 GRAPLQ8TC17 118 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 MCRS1Q96EZ8 462 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 CNDP1Q96KN2 507 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF778Q96MU6 729 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 DACH2Q96NX9 599 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 HERPUD2Q9BSE4 406 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 TSEN34Q9BSV6 310 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 LHPPQ9H008 270 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC6A17Q9H1V8 727 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 LRRC40Q9H9A6 602 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 PLSCR3Q9NRY6 295 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 STOML2Q9UJZ1 356 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 BAG5Q9UL15 447 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 MAPRE3Q9UPY8 281 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 GRIP1Q9Y3R0 1128 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 SNX13Q9Y5W8 968 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 DGKBQ9Y6T7 804 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 PTPRFP10586 1907 aa8.96□□□□□ -0.98
CDC42BPA-206ENST00000429440 SNED1Q8TER0 1413 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNFX1Q9P2E3 1918 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF98A6NK75 572 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF487B1APH4 448 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 TRIM38O00635 465 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 SOCS2O14508 198 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PAPSS1O43252 624 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 DCXO43602 365 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF780AO75290 641 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PRKD3O94806 890 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 MTHFD1P11586 935 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 NCF2P19878 526 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 TCN1P20061 433 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 MMP8P22894 467 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 EEF1B2P24534 225 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 UQCRC1P31930 480 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 POLR2IP36954 125 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PSMD8P48556 350 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ADCY7P51828 1080 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ACTR2P61160 394 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 MPP1Q00013 466 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 INCA1Q0VD86 236 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PEX6Q13608 980 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 CTF1Q16619 201 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 DCAF17Q5H9S7 520 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 TTC39BQ5VTQ0 682 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PLEKHM3Q6ZWE6 761 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 KRT77Q7Z794 578 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 GATAD2AQ86YP4 633 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 CDH26Q8IXH8 852 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 FNDC5Q8NAU1 212 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 TP53I13Q8NBR0 393 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 URGCPQ8TCY9 931 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 TNIP3Q96KP6 325 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 FUNDC2Q9BWH2 189 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 RAB34Q9BZG1 259 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PDZD7Q9H5P4 517 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ACAD9Q9H845 621 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 EFCAB1Q9HAE3 211 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 NGRNQ9NPE2 291 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 NECTIN3Q9NQS3 549 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 MAP3K20Q9NYL2 800 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 KIF17Q9P2E2 1029 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms