RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.84□□□□□ -0.19
THBS3-202ENST00000428962 STX18Q9P2W9 335 aaKnown RBP13.84□□□□□ -0.19
THBS3-202ENST00000428962 VTI1BQ9UEU0 232 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 SRRDQ9UH36 339 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 FBXO5Q9UKT4 447 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 ANGPTL2Q9UKU9 493 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 KRT36O76013 467 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 CPB1P15086 417 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 NCF2P19878 526 aaPredicted RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 AVPR1AP37288 418 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 GRIA4P48058 902 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 CLCN5P51795 746 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 KPNA1P52294 538 aaPredicted RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 USP46P62068 366 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 ITKQ08881 620 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 LAMB3Q13751 1172 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 MRPL58Q14197 206 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 PSMD5Q16401 504 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 PARP15Q460N3 678 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 FAM171A1Q5VUB5 890 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 SEL1L3Q68CR1 1132 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 ATG14Q6ZNE5 492 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 CENPLQ8N0S6 344 aaPredicted RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 FSTL5Q8N475 847 aaPredicted RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 MAB21L3Q8N8X9 362 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 SLC43A3Q8NBI5 491 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 TSPAN17Q96FV3 270 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 SPATA17Q96L03 361 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 OXCT2Q9BYC2 517 aaPredicted RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 MRPL46Q9H2W6 279 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 STARD7Q9NQZ5 370 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.83□□□□□ -0.2
THBS3-202ENST00000428962 SLC2A6Q9UGQ3 507 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 MYLKQ15746 1914 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 A0A1W2PQ45 241 aaPredicted RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 A0A1W2PQY0 241 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 HDAC3O15379 428 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 SERPINB5P36952 375 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 CD86P42081 329 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 CHRNA4P43681 627 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 MAPKAPK2P49137 400 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 RPL14P50914 215 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 RING1Q06587 406 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 IL10RBQ08334 325 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 ELAVL2Q12926 359 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 USP4Q13107 963 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 MUM1Q2TAK8 710 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 C10orf120Q5SQS8 335 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 TSTD2Q5T7W7 516 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 C1orf146Q5VVC0 180 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 SNX30Q5VWJ9 437 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 ACAD11Q709F0 780 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 LRRC8DQ7L1W4 858 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 GALNT7Q86SF2 657 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 LMNTD2Q8IXW0 634 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 TEX26Q8N6G2 289 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 GPATCH11Q8N954 259 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 FBXO27Q8NI29 283 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 C2orf15Q8WU43 125 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 PDCD6IPQ8WUM4 868 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 PABPC5Q96DU9 382 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 NAF1Q96HR8 494 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 MRPL57Q9BQC6 102 aaKnown RBP13.83□□□□□ -0.2
THBS3-202ENST00000428962 GPAMQ9HCL2 828 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 TCF7L2Q9NQB0 619 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 XPR1Q9UBH6 696 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 ZNF212Q9UDV6 495 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 PCDHB7Q9Y5E2 793 aa13.83□□□□□ -0.2
THBS3-202ENST00000428962 DRGXA6NNA5 263 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 MEI4A8MW99 385 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 H7C4K7 107 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 MATN2O00339 956 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 SLC22A2O15244 555 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 NVLO15381 856 aaKnown RBP13.82□□□□□ -0.2
THBS3-202ENST00000428962 RAMP2O60895 175 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 IGLV3-27P01718 113 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 SELPP16109 830 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 ACADSP16219 412 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 FGFR3P22607 806 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 CPOXP36551 454 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 GLRBP48167 497 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 YBEYP58557 167 aaPredicted RBP13.82□□□□□ -0.2
THBS3-202ENST00000428962 ACTR3P61158 418 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 MGAT5BQ3V5L5 792 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 ALFQ53S48 1182 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 VWA5B1Q5TIE3 1220 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 RAP1GAP2Q684P5 730 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 FBXL22Q6P050 247 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 FBXO46Q6PJ61 603 aaPredicted RBP13.82□□□□□ -0.2
THBS3-202ENST00000428962 RIPOR1Q6ZS17 1223 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 TMC7Q7Z402 723 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 MIB1Q86YT6 1006 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 TMEM151AQ8N4L1 468 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 SLC25A41Q8N5S1 370 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 ATAD1Q8NBU5 361 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms