RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 MUC6Q6W4X9 2439 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TCRBV7S2A1N4TA0A589 114 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 APOC4-APOC2K7ER74 178 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 NEMP1O14524 444 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 LILRB5O75023 590 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 PEX11BO96011 259 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 APOC2P02655 101 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 BCL2L1Q07817 233 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 PPIDQ08752 370 aaKnown RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 CCDC15Q0P6D6 951 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 ZNF805Q5CZA5 627 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 RGL4Q8IZJ4 473 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 PGBD5Q8N414 524 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 UBE2Q2Q8WVN8 375 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 NKD2Q969F2 451 aaPredicted RBP14.75□□□□□ -0.05
SGCE-204ENST00000428696 ARRDC3Q96B67 414 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 SEMA3CQ99985 751 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 FERMT1Q9BQL6 677 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 TLR10Q9BXR5 811 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 BRD8Q9H0E9 1235 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 ATP13A3Q9H7F0 1226 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 EFR3BQ9Y2G0 817 aa14.75□□□□□ -0.05
SGCE-204ENST00000428696 C16orf96A6NNT2 1141 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 F5H423 210 aaPredicted RBP14.74□□□□□ -0.05
SGCE-204ENST00000428696 FSBPO95073 299 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 PCDH8O95206 1070 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 SEMA4FO95754 770 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 SERPINA4P29622 427 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 HSPA9P38646 679 aaKnown RBP14.74□□□□□ -0.05
SGCE-204ENST00000428696 NSUN2Q08J23 767 aaKnown RBP eCLIP14.74□□□□□ -0.05
SGCE-204ENST00000428696 PLK5Q496M5 336 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 LRRC73Q5JTD7 316 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 USP30Q70CQ3 517 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 ERN2Q76MJ5 926 aaKnown RBP14.74□□□□□ -0.05
SGCE-204ENST00000428696 C11orf74Q86VG3 221 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 OLFM3Q96PB7 478 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 OSBPL1AQ9BXW6 950 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 POLR1EQ9GZS1 481 aaKnown RBP14.74□□□□□ -0.05
SGCE-204ENST00000428696 MIR1-1HGQ9H1L0 117 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 DUSP15Q9H1R2 295 aaPredicted RBP14.74□□□□□ -0.05
SGCE-204ENST00000428696 NOD2Q9HC29 1040 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 WSB2Q9NYS7 404 aaPredicted RBP14.74□□□□□ -0.05
SGCE-204ENST00000428696 SMG5Q9UPR3 1016 aaKnown RBP14.74□□□□□ -0.05
SGCE-204ENST00000428696 PCDHGC4Q9Y5F7 938 aa14.74□□□□□ -0.05
SGCE-204ENST00000428696 LRRC72A6NJI9 287 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 MEI4A8MW99 385 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 LMNAP02545 664 aaKnown RBP14.73□□□□□ -0.05
SGCE-204ENST00000428696 RBP3P10745 1247 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 PTPN7P35236 360 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 DRD3P35462 400 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 PTGER3P43115 390 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 DSC2Q02487 901 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 CREB5Q02930 508 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 ZBTB17Q13105 803 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 SNX1Q13596 522 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 LONRF2Q1L5Z9 754 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 NCEH1Q6PIU2 408 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 PID1Q7Z2X4 250 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 KDELC2Q7Z4H8 507 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 TTC13Q8NBP0 860 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 MAML1Q92585 1016 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 LRIG1Q96JA1 1093 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 HSPA12BQ96MM6 686 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 CARD9Q9H257 536 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 SUV39H2Q9H5I1 410 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 SGK2Q9HBY8 427 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 KLHL8Q9P2G9 620 aaPredicted RBP14.73□□□□□ -0.05
SGCE-204ENST00000428696 NCDNQ9UBB6 729 aa14.73□□□□□ -0.05
SGCE-204ENST00000428696 MUC22E2RYF6 1773 aaPredicted RBP14.72□□□□□ -0.05
SGCE-204ENST00000428696 CACNA1HO95180 2353 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 A8MX80 341 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 KCNN4O15554 427 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 ATP1A1P05023 1023 aaKnown RBP14.72□□□□□ -0.05
SGCE-204ENST00000428696 PRKCGP05129 697 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 HLA-DQB2P05538 268 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 ITGB7P26010 798 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 MAOBP27338 520 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 RBL1P28749 1068 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 MAT2AP31153 395 aaKnown RBP14.72□□□□□ -0.05
SGCE-204ENST00000428696 NBL1P41271 181 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 MAPK8P45983 427 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 CSNK1DP48730 415 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 NEK3P51956 506 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 AP1S1P61966 158 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 SEMG2Q02383 582 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 GRM3Q14832 879 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 NOMO1Q15155 1222 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 CCDC6Q16204 474 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 SLC45A4Q5BKX6 768 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 SYCP2LQ5T4T6 812 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 PARS2Q7L3T8 475 aaKnown RBP14.72□□□□□ -0.05
SGCE-204ENST00000428696 SLC13A5Q86YT5 568 aaPredicted RBP14.72□□□□□ -0.05
SGCE-204ENST00000428696 CDKL3Q8IVW4 592 aaPredicted RBP14.72□□□□□ -0.05
SGCE-204ENST00000428696 TEX26Q8N6G2 289 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 C1orf54Q8WWF1 131 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 HTR3CQ8WXA8 447 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 ATG4AQ8WYN0 398 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 PIGKQ92643 395 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 NUDCD1Q96RS6 583 aa14.72□□□□□ -0.05
SGCE-204ENST00000428696 TUBGCP5Q96RT8 1024 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms