RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 OR8D1Q8WZ84 308 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 CPT1BQ92523 772 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 IFT43Q96FT9 208 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 MYO19Q96H55 970 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 UHRF1Q96T88 793 aaPredicted RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 GORASP1Q9BQQ3 440 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 MLPHQ9BV36 600 aaPredicted RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 FICDQ9BVA6 458 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 FOXQ1Q9C009 403 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 EPC1Q9H2F5 836 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 TMEM245Q9H330 911 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 MFSD1Q9H3U5 465 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 ATP13A3Q9H7F0 1226 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 LRRC40Q9H9A6 602 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 TBC1D17Q9HA65 648 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 LTB4R2Q9NPC1 389 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 FAM114A2Q9NRY5 505 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 FAM153AQ9UHL3 310 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 EVLQ9UI08 416 aaPredicted RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 ANAPC5Q9UJX4 755 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 HCN2Q9UL51 889 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 TPX2Q9ULW0 747 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 SHOC2Q9UQ13 582 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 STARD13Q9Y3M8 1113 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 FARP1Q9Y4F1 1045 aaPredicted RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 BDP1A6H8Y1 2624 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 NYNRINQ9P2P1 1898 aaKnown RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 TICRRQ7Z2Z1 1910 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 KANSL1LA0AUZ9 987 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 SHISA7A6NL88 538 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 ERI2A8K979 691 aaKnown RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 WASH3PC4AMC7 463 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 PSMD3O43242 534 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 SIN3BO75182 1162 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 USP12O75317 370 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZNF821O75541 412 aaPredicted RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 TMEM63AO94886 807 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 PIGNO95427 931 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 POP4O95707 220 aaKnown RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 AP2A1O95782 977 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 UGT2B4P06133 528 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 MMP2P08253 660 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 HNRNPLP14866 589 aaKnown RBP eCLIP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 ITIH2P19823 946 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 CR2P20023 1033 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 SERPINA4P29622 427 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 NTSR1P30989 418 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 GKP32189 559 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 PSMD8P48556 350 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 CSNK1DP48730 415 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 PLTPP55058 493 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 BCL2L1Q07817 233 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 NSUN2Q08J23 767 aaKnown RBP eCLIP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 TRAF2Q12933 501 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 MPP3Q13368 585 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 CCINQ13939 588 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 KCNJ11Q14654 390 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 TRADDQ15628 312 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 SLC14A2Q15849 920 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 MYLK3Q32MK0 819 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 RALGPS1Q5JS13 557 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 ANKRD22Q5VYY1 191 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 NCEH1Q6PIU2 408 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 KDELC1Q6UW63 502 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 Q6ZS52 159 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 KDELC2Q7Z4H8 507 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 HOOK3Q86VS8 718 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 CACUL1Q86Y37 369 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 STK40Q8N2I9 435 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 IL17RCQ8NAC3 791 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 TXNDC5Q8NBS9 432 aaKnown RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 CHST14Q8NCH0 376 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 LPCAT1Q8NF37 534 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 MYRIPQ8NFW9 859 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 OR2A12Q8NGT7 310 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 RPLP0P6Q8NHW5 317 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 KCNV2Q8TDN2 545 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 RUBCNQ92622 972 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 PRCCQ92733 491 aaPredicted RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 FEM1CQ96JP0 617 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 TUBGCP5Q96RT8 1024 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 TBL1YQ9BQ87 522 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 APOL2Q9BQE5 337 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 HEPHQ9BQS7 1158 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 TDRD1Q9BXT4 1180 aaKnown RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 ANKZF1Q9H8Y5 726 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 EIF2B3Q9NR50 452 aaKnown RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 VPS45Q9NRW7 570 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 PIH1D1Q9NWS0 290 aaKnown RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 GRHL1Q9NZI5 618 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 WHRNQ9P202 907 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 SUN2Q9UH99 717 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 IL36AQ9UHA7 158 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 AAR2Q9Y312 384 aaKnown RBP8□□□□□ -1.13
HMGA1P4-201ENST00000428643 RAI2Q9Y5P3 530 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 KIAA1549LQ6ZVL6 1849 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 C5orf42Q9H799 3197 aa8□□□□□ -1.13
HMGA1P4-201ENST00000428643 TCRBV7S3A2A0A539 114 aa7.99□□□□□ -1.13
HMGA1P4-201ENST00000428643 FAM170BA6NMN3 283 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms